TCONS_00021954-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021954-protein
Unique NameTCONS_00021954-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length365

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021954-protein ID=TCONS_00021954-protein|Name=TCONS_00021954-protein|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
MEQLFLKIMILYLIFIQRVETSNILQDKNVCSNENFYLRKVEKRTIKLKE
TPIEIPGIQYYQQCFAQCQKHQCSIFDFRKPVNGENSGSCSVYPGKSEKR
TQVSTRFVENGNHSFFERVPCPLEKPEKSIQGTFKEAKSCSDVKNFGGTQ
SGLYEINETIKTSSSNHLQYILCNMNELGGGWTTIMHNQGDITFAGDWEA
YKQGFGDYRKSFWAGNNFIHQLTANEDTELLVILKDDQSVMYYGHYKTFF
IGDEGSNYKLTIGQHREIPGVINLPQSVDDQFYVHNRAPFSTKDKDWSSK
ECAIDFDVGWWFTGCYKVDLVSQVCGEETNYLTGNSGIHWHDAKNSGWEN
YCFTESTMLVRKHRN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012320XLOC_012320Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021954TCONS_00021954Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
IPR003609Pan_app
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 135..363
e-value: 3.1E-24
score: 96.5
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 138..361
e-value: 7.8E-38
score: 130.4
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 131..364
score: 28.078
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 136..361
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 289..351
e-value: 2.5E-10
score: 39.8
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 26..288
e-value: 2.2E-38
score: 131.7
IPR003609PAN/Apple domainPROSITEPS50948PANcoord: 31..121
score: 7.479

Blast
[Close]
BLAST of TCONS_00021954-protein vs. Swiss-Prot (Human)
Match: FCN2 (Ficolin-2 OS=Homo sapiens GN=FCN2 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.839e-27
Identity = 82/245 (33.47%), Postives = 112/245 (45.71%), Query Frame = 0 
Query:  125 KPEKSIQGTFKEAKSCSDVKNFGGTQSGLYEINETIKTSSSNHLQYILCNMNELGGGWTTIMHN-QGDITFAGDWEAYKQGFGDYRKSFWAGNNFIHQLTANEDTELLVILKDDQSVMYYGHYKTFFIGDEGSNYKLTIGQHREIPGVINLPQSVDDQFYVHNRAPFSTKDK--DWSSKECAIDFDVGWWFTGCYKVDLVSQVCGEETNYLTGN-----SGIHWHDAKNSGWENYCFTESTMLVR 361
            +P+  + G     ++C D+ + G   SG +    TI       L  +LC+M+  GGGWT       G + F  DW  YKQGFG     FW GN+ IH LTA   +EL V L D +    +  Y++F + DE   Y L +G   E         S  D    HN   FSTKD+  D ++  CA+ F   WW+  C+    VS + G    YL G      +GI+W   K     NY +  S M VR
Sbjct:   94 EPQPCLTG----PRTCKDLLDRGHFLSGWH----TIYLPDCRPLT-VLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFVE--------GSAGDSLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCH----VSNLNGR---YLRGTHGSFANGINWKSGKGY---NYSYKVSEMKVR 311
The following BLAST results are available for this feature:
BLAST of TCONS_00021954-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN21.839e-2733.47Ficolin-2 OS=Homo sapiens GN=FCN2 PE=1 SV=2[more]
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