TCONS_00021276-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00021276-protein
Unique Name	TCONS_00021276-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	369

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00021276-protein ID=TCONS_00021276-protein|Name=TCONS_00021276-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
MIPAVVSIALFIVLTITFSFKTKRGKFLPPGPSGLPIIGYLHKLGSKPLH
LLLADLGETYGDIFSLQLGSRLTVILNSKDAVYETFVKKAKIFAGRPDLA
TFTTTRHGATGISMCDYTDEYKRNRQMTLKAMHSLYADKERFNEILQHEA
TKMINLFNEKSLTNERFDPANEFHKVVPSIMVHVMYGKNSPYDDKDVMSL
VNVNKRWFQSAEGSNPADFLKFLERFPNKRLDAIQESCMMFYKFAFQKME
EYEQQECSGLYGTYIQLYKEKTGVTELTNKDRFELGRCVNDMLGGGFDTL
AATLTWALLYLWKRPEVIAKCREEIERVLSDEDMIGLHHEKXDRTCSERR
RYDWSASRKAIILLYGYNT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011906	XLOC_011906	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00021276	TCONS_00021276	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002401	Cyt_P450_E_grp-I
IPR001128	Cyt_P450

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002401	Cytochrome P450, E-class, group I	PRINTS	PR00463	EP450I	coord: 304..330 score: 38.92 coord: 176..194 score: 18.55 coord: 81..102 score: 32.31 coord: 284..301 score: 27.57 coord: 57..76 score: 38.78
None	No IPR available	GENE3D	1.10.630.10		coord: 20..349 e-value: 5.4E-54 score: 183.1
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 29..333 e-value: 5.0E-48 score: 163.9
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 28..337

Blast

[Close]

BLAST of TCONS_00021276-protein vs. Swiss-Prot (Human)
Match: CP1A2 (Cytochrome P450 1A2 OS=Homo sapiens GN=CYP1A2 PE=1 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 2.029e-35
Identity = 83/324 (25.62%), Postives = 159/324 (49.07%), Query Frame = 0

Query:   21 KTKRGKFLPPGPSGLPIIGYLHKLGSKPLHLLLADLGETYGDIFSLQLGSRLTVILNSKDAVYETFVKKAKIFAGRPDLATFTTTRHGATGISMCDYTDEYKRNRQMTLKAMH--SLYADKER-----FNEILQHEATKMINLFNEKSLTNERFDPANEFHKVVPSIMVHVMYGKNSPYDDKDVMSLVNVNKRWFQSAEGSNPADFLKFLERFPN---KRLDAIQESCMMFYKFAFQK-MEEYEQQECSGLYGTYIQLYKEKTGVT-ELTNKDRFELGRCVNDMLGGGFDTLAATLTWALLYLWKRPEVIAKCREEIERVLSDE 332
            +  +G   PP P G P++G++  LG  P HL L+ + + YGD+  +++GS   ++L+  D + +  V++   F GRPDL T T    G +     D    +   R++   A++  S+ +D          E +  EA  +I+   E       FDP N+    V +++  + +G++ P    +++SLV     + ++A   NP DF   L   PN   +R  A  +  + F +   Q+  +++++     + G   +  K+    +  L  +++  +   VND+ G GFDT+   ++W+L+YL  +PE+  K ++E++ V+  E
Sbjct:   34 RVPKGLKSPPEPWGWPLLGHVLTLGKNP-HLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEK--IVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRE 354

The following BLAST results are available for this feature:

BLAST of TCONS_00021276-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00021276-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CP1A2	2.029e-35	25.62	Cytochrome P450 1A2 OS=Homo sapiens GN=CYP1A2 PE=1...	[more]

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TCONS_00021276-protein (polypeptide) - C. hemisphaerica