TCONS_00021273-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00021273-protein
Unique Name	TCONS_00021273-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	496

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00021273-protein ID=TCONS_00021273-protein|Name=TCONS_00021273-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
MISVAIMFLLLGLVLKYVAVGDQKKPRKLPSPTALPIIGHLHLIGSKSLH
VVLESMSNIFGKVYSLKLGAHHITVLCSQKAMKEAFVKNAKKFSGRPDLP
TFSYTRYGRTGISLCDHSPLYVQNRKRAVQSLHKFLMNEKNMIGIFQKEA
SKMVALFNQYVSEGKTFNPSHDFERIIPSMFLSIMYGIDLPYLSTDLKEV
SRVYRDWFEVAEADNPADFFPVLQKFPNKRLSVISNCGKEFERFNMDMLR
KELQKPSDENNNGVNAAPTTILENLLKNETAESLESEDTCKELAKLVSDM
IGAGFDTIPSTLSWAFIYLSNNPNIVKKCREELDGLSTDTNNFNYTNKSK
TPYFMATIYEILRMSCVAPTGVLHKSNEEALIQGYVIPKNTIVIANLHQM
NFDESTWLKPNELRPERFLNDSNELDSKLCNEIATFSVGTRRCPGDKLAV
AMMYAILGTFIAKYDINMVQSPIDMQPLRGMTSKPKDFLLQLTHVN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011905	XLOC_011905	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00021273	TCONS_00021273	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001128	Cyt_P450
IPR002401	Cyt_P450_E_grp-I
IPR017972	Cyt_P450_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001128	Cytochrome P450	PRINTS	PR00385	P450	coord: 443..454 score: 33.37 coord: 303..320 score: 39.23 coord: 356..367 score: 37.23 coord: 434..443 score: 45.26
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 30..489 e-value: 3.2E-81 score: 273.3
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 30..493
IPR002401	Cytochrome P450, E-class, group I	PRINTS	PR00463	EP450I	coord: 396..420 score: 35.75 coord: 81..102 score: 36.36 coord: 292..309 score: 31.54 coord: 57..76 score: 29.9 coord: 312..338 score: 31.07 coord: 355..373 score: 34.23 coord: 433..443 score: 42.94 coord: 443..466 score: 22.88
None	No IPR available	GENE3D	1.10.630.10		coord: 12..495 e-value: 4.5E-96 score: 321.9
IPR017972	Cytochrome P450, conserved site	PROSITE	PS00086	CYTOCHROME_P450	coord: 436..445

Blast

[Close]

BLAST of TCONS_00021273-protein vs. Swiss-Prot (Human)
Match: CP1A1 (Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.716e-64
Identity = 128/488 (26.23%), Postives = 241/488 (49.39%), Query Frame = 0

Query:    5 AIMFLLLGLVLKYVAVGDQKKPRKLPSPTALPIIGHLHLIGSKSLHVVLESMSNIFGKVYSLKLGAHHITVLCSQKAMKEAFVKNAKKFSGRPDLPTFSYTRYGRTGISLCDHSPLYVQNRKRAVQSLHKFLMNEKNMIGI-------FQKEASKMVALFNQYVSEGKTFNPSHDFERIIPSMFLSIMYGIDLPYLSTDLKEVSRVYRDWFEVAEADNPADFFPVLQKFPNKRLSVISNCGKEFERFNMDMLRKELQKPSDENNNGVNAAPTTILENLLKNETAESLESEDTCKELAKLVSDMIGAGFDTIPSTLSWAFIYLSNNPNIVKKCREELDGLSTDTNNFNYTNKSKTPYFMATIYEILRMSCVAPTGVLHKSNEEALIQGYVIPKNTIVIANLHQMNFDESTWLKPNELRPERFLNDSNELDSKLCNEIATFSVGTRRCPGDKLAVAMMYAILGTFIAKYDINM-VQSPIDMQPLRGMTSK 484
            +++F L+  V++       K  +  P P   P+IGH+  +G K+ H+ L  MS  +G V  +++G+  + VL     +++A V+    F GRPDL TF+    G++     D  P++   R+ A   L  F +                 KEA  +++   + ++    FNP       + ++  +I +G    +   +L  +  +  ++ EV  + NPADF P+L+  PN  L+   +  ++F  F   M+ KE  K  ++ +  +     +++E+  + +  E+   + + +++  +V D+ GAGFDT+ + +SW+ +YL  NP + +K +EELD +   +     +++S  PY  A I E  R S   P  + H +  +  ++G+ IPK   V  N  Q+N D+  W+ P+E  PERFL     +D  L  ++  F +G R+C G+ +A   ++  L   + + + ++ +   +DM P+ G+T K
Sbjct:   16 SVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLG-KNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMV-KEHYKTFEKGH--IRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTPIYGLTMK 499

The following BLAST results are available for this feature:

BLAST of TCONS_00021273-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00021273-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CP1A1	1.716e-64	26.23	Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1...	[more]

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TCONS_00021273-protein (polypeptide) - C. hemisphaerica