TCONS_00021189-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021189-protein
Unique NameTCONS_00021189-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length396

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021189-protein ID=TCONS_00021189-protein|Name=TCONS_00021189-protein|organism=Clytia hemisphaerica|type=polypeptide|length=396bp
MKPPTALEKLPLPPLVSIGLILIILSFAIIVPLYFIIKYKQECFKFWKKL
FKPFIKYCLAGDAADGIDLCKVQLTKRTFYERVHPSVNELEFSRLDENDT
KFGITLGQVHFGLNYDSVKNILKIKIYEAKDLPAADEGGASDPYIRIMLL
PDTKKRFETIVLDDTLDPVYNQEFVFKNMPLSELQKRKLCIQALDFDTQP
IHDILGETLIPLIDLNIVTKHNSKDLIDFWRILVPGYDPDNPGEFKQSQS
DYGDICVSLHYMPAVATLKVYIIECKNLKSVDEGGVSDPFVKVTIMKNKV
KLKSQKTEVIKQTLDPYYNKEMKFKLDPADAPVTDLRFLVMDYDFPIGAD
VIGEVVIGANSYGPQKRQWRDMLRSQKRPIACWHMLRPKTKKGEED
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011867XLOC_011867Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021189TCONS_00021189Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR001565Synaptotagmin
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPRINTSPR00360C2DOMAINcoord: 137..149
score: 44.1
coord: 164..177
score: 41.2
coord: 189..197
score: 37.21
IPR000008C2 domainSMARTSM00239C2_3ccoord: 267..381
e-value: 3.5E-19
score: 79.7
coord: 121..224
e-value: 7.2E-13
score: 58.8
IPR000008C2 domainGENE3D2.60.40.150coord: 238..395
e-value: 3.0E-33
score: 114.2
coord: 88..237
e-value: 1.0E-25
score: 89.7
IPR000008C2 domainPFAMPF00168C2coord: 267..370
e-value: 9.2E-19
score: 67.6
coord: 121..214
e-value: 4.4E-17
score: 62.2
IPR000008C2 domainPROSITEPS50004C2coord: 267..356
score: 16.169
IPR000008C2 domainPROSITEPS50004C2coord: 118..209
score: 16.569
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 252..388
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 105..234
IPR001565SynaptotagminPRINTSPR00399SYNAPTOTAGMNcoord: 124..137
score: 38.66
coord: 180..195
score: 32.54
coord: 200..210
score: 24.6
coord: 109..124
score: 26.84
NoneNo IPR availableCDDcd00276C2B_Synaptotagmincoord: 253..386
e-value: 4.32591E-46
score: 155.434

Blast
[Close]
BLAST of TCONS_00021189-protein vs. Swiss-Prot (Human)
Match: SYT1 (Synaptotagmin-1 OS=Homo sapiens GN=SYT1 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.029e-64
Identity = 121/284 (42.61%), Postives = 168/284 (59.15%), Query Frame = 0 
Query:  106 LGQVHFGLNYDSVKNILKIKIYEAKDLPAADEGGASDPYIRIMLLPDTKKRFETIVLDDTLDPVYNQEFVFKNMPLSELQKRKLCIQALDFDTQPIHDILGETLIPL--IDLNIVTKHNSKDLIDFWRILVPGYDPDNPGEFKQSQSDYGDICVSLHYMPAVATLKVYIIECKNLKSVDEGGVSDPFVKVTIMKNKVKLKSQKTEVIKQTLDPYYNKEMKFKLDPADAPVTDLRFLVMDYDFPIGADVIGEVVIGANSYGPQKRQWRDMLRSQKRPIACWHMLR 387
            LG++ + L+YD   N L + I +A +LPA D GG SDPY+++ LLPD KK+FET V   TL+PV+N++F FK +P SEL  + L +   DFD    HDI+GE  +P+  +D   VT+         WR        D     K+ Q   GDIC SL Y+P    L V I+E KNLK +D GG+SDP+VK+ +M+N  +LK +KT + K TL+PYYN+   F++         +   V+DYD     D IG+V +G NS G + R W DML + +RPIA WH L+
Sbjct:  143 LGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFK-VPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEE--------WR--------DLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQ 409
The following BLAST results are available for this feature:
BLAST of TCONS_00021189-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYT17.029e-6442.61Synaptotagmin-1 OS=Homo sapiens GN=SYT1 PE=1 SV=1[more]
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