TCONS_00021187-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021187-protein
Unique NameTCONS_00021187-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length157

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021187-protein ID=TCONS_00021187-protein|Name=TCONS_00021187-protein|organism=Clytia hemisphaerica|type=polypeptide|length=157bp
MAGLIAKKNQAKLAEKIYRSTHFSRCEVENLLNVFRVHGANQKTNKMDRT
KFRTVLHNTFQMTDDILMDRIFRAFDTDNDSNISMEEWIMGLSVFLRGTL
DEQARYCFNVYDLNSDGYITREEMYHMLKHSLIKQPTEEDPDEGVKDLVE
IILKKMV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011865XLOC_011865Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021187TCONS_00021187Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00450RECOVERINcoord: 95..114
score: 33.08
coord: 117..135
score: 27.33
coord: 71..92
score: 40.38
coord: 9..23
score: 18.97
NoneNo IPR availableGENE3D1.10.238.10coord: 81..116
e-value: 1.1E-14
score: 53.5
NoneNo IPR availableGENE3D1.10.238.10coord: 117..155
e-value: 2.9E-6
score: 26.7
NoneNo IPR availableGENE3D1.10.238.10coord: 11..80
e-value: 8.3E-9
score: 34.8
IPR002048EF-hand domainSMARTSM00054efh_1coord: 103..131
e-value: 0.18
score: 20.9
coord: 67..95
e-value: 0.2
score: 20.7
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 70..128
e-value: 2.5E-9
score: 37.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 63..98
score: 11.25
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 99..134
score: 13.007
IPR002048EF-hand domainCDDcd00051EFhcoord: 70..129
e-value: 3.61402E-9
score: 48.3129
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 112..124
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 12..156

Blast
[Close]
BLAST of TCONS_00021187-protein vs. Swiss-Prot (Human)
Match: EFCB1 (EF-hand calcium-binding domain-containing protein 1 OS=Homo sapiens GN=EFCAB1 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.537e-56
Identity = 84/155 (54.19%), Postives = 117/155 (75.48%), Query Frame = 0 
Query:    7 KKNQAKLAEKIYRST-HFSRCEVENLLNVFR--VHGANQK--TNKMDRTKFRTVLHNTFQMTDDILMDRIFRAFDTDNDSNISMEEWIMGLSVFLRGTLDEQARYCFNVYDLNSDGYITREEMYHMLKHSLIKQPTEEDPDEGVKDLVEIILKKM 156
            +K   KL + + ++  HF++ EV  L+ +F   V G  ++     +DR  FR +LH TF MTDD++MDR+FR FD DND  +++ EWI GLS+FLRG+L+E+ +YCF V+DLN DG+I++EEM+HMLK+SL+KQP+EEDPDEG+KDLVEI LKKM
Sbjct:    3 RKKLQKLTDTLTKNCKHFNKFEVNCLIKLFYDLVGGVERQGLVVGLDRNAFRNILHVTFGMTDDMIMDRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKM 157
The following BLAST results are available for this feature:
BLAST of TCONS_00021187-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EFCB11.537e-5654.19EF-hand calcium-binding domain-containing protein ... [more]
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