TCONS_00021186-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00021186-protein
Unique Name	TCONS_00021186-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	780

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00021186-protein ID=TCONS_00021186-protein|Name=TCONS_00021186-protein|organism=Clytia hemisphaerica|type=polypeptide|length=780bp
MDKKGLPDTRKIILTRSEPLVNLKKLRELSGFKAYNTTLYNQNRYHSHFG
ASQQRVVHPPSSTRNKLTIVSPKRRVRIPAKPQVPLKDVLRLRTRADGES
NCSTDEERIRIPGDGCYSETDSSDNEDDLESDTSTFVNDVDSIVQDKSFL
CESNTADSEDTETINNNEDDDAKDDIQSDLYEDDVIDYETESSSTSGKDS
TNVSDEEESLSSLNSACSLRLKFSKCSMKEDSPLPLLKSLFSNKPPTLYF
TIAEEQENSDWLGVWGKHMKPPAFKGIDVFQKINHFPGTFHIGRKDKLWR
NFCKMKIAYGKQDFNFVPQTYVLPHDLGQLKKVWEEGSTKNKWIIKPPAS
ARGSGIKVINKWSQVPKKRPVVVQRYLAKPYLINGHKFDLRIYVYVTSFD
PLRIYIFEDGLVRFATSKYSSSSKSLSNRYMHLTNYSVNKNNTSVYQSNN
DNLEDSKTSYKWSLKELWKYFQNIGISSDRIWESIKDVAIKSILCGEANI
NTLIKQNISNRLSCHELFGLDIILDTKLKPWLLEVNISPSLHSNSDLDKK
IKGQLVKDILNMTGFFLPRSLLINNSGRTSNIDEIAAERFWFEQRTLSSD
EKTKHTFYVQRHEDLRTRCTILDILTPDDVMIIMETEDEFSRSGSFERLM
PTSEQKNYLQFMQTPRYYNLLLDEWTKQYMRDAVRSGIGISLIQSLAEAG
VHLSDSVSVHPRHQWLQGGSRNYLNRPMFSAFPSLNHRRKKSPQISPSLY
SSRSSHNKHPGSGKKETTSSKTATRKGASR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011864	XLOC_011864	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00021186	TCONS_00021186	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004344	TTL/TTLL_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0006464	cellular protein modification process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006464	cellular protein modification process

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004344	Tubulin-tyrosine ligase/Tubulin polyglutamylase	PFAM	PF03133	TTL	coord: 280..562 e-value: 1.8E-93 score: 312.8
IPR004344	Tubulin-tyrosine ligase/Tubulin polyglutamylase	PROSITE	PS51221	TTL	coord: 222..575 score: 49.281
None	No IPR available	GENE3D	3.30.470.20		coord: 304..618 e-value: 1.1E-23 score: 83.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 734..780
None	No IPR available	SUPERFAMILY	56059	Glutathione synthetase ATP-binding domain-like	coord: 291..412 coord: 469..561

Blast

[Close]

BLAST of TCONS_00021186-protein vs. Swiss-Prot (Human)
Match: TTLL4 (Tubulin polyglutamylase TTLL4 OS=Homo sapiens GN=TTLL4 PE=1 SV=2)

HSP 1 Score: 488.419 bits (1256), Expect = 2.652e-157
Identity = 266/612 (43.46%), Postives = 375/612 (61.27%), Query Frame = 0

Query:  152 ESNTADSEDTETINNNEDDDAKDDIQSDLYEDDVIDYETESSSTSGKDSTNVSDEEESLSSLNSACSLRLKFSKCSMKEDSPL---------PLLKSLFSNKPPTLYFTIAEE-------------------------------------QENSDWLGVWGKHMKPPAFKGIDVFQKINHFPGTFHIGRKDKLWRNFCKMKIAYGKQDFNFVPQTYVLPHDLGQLKKVWEEGSTKNKWIIKPPASARGSGIKVINKWSQVPKKRPVVVQRYLAKPYLINGHKFDLRIYVYVTSFDPLRIYIFEDGLVRFATSKYSSSSKSLSNRYMHLTNYSVNKNNTSVYQSNNDNLEDSKTSYKWSLKELWKYFQNIGISSDRIWESIKDVAIKSILCGEANINTLIKQNISNRLSCHELFGLDIILDTKLKPWLLEVNISPSLHSNSDLDKKIKGQLVKDILNMTGFFLPRSLLINNSGRTSNIDEIAAERFWFEQRTLSSD----EKTKHTFYV-QRHEDLRTRCTILDILTPDDVMIIMETEDEFSRSGSFERLMPTSEQKNYLQFMQTPRYYNLLLDEWTKQYMRDAVRSGIGISLIQSLAEAGVHL---SDSVSV 709
            E+   DS D +   ++  D   D  +++  E++++D   +  S    +      E  SLS+++ + S+ +    C      PL          L+ SLF N PPT+YF   +E                                     + N DWLG WG HMK P+F+ I   QK+NHFPG+F IGRKD+LWRN  +M+  +GK++F+F PQ+++LP D   L+K WE  S++ KWI+KPPASARG GI+VI+KWSQ+PK+RP++VQRYL KPYLI+G KFDLRIYVYVTS+DPLRIY+F DGLVRFA+ KYS S KSL N++MHLTNYSVNK N   YQ+N D  E +   +KW+LK LW Y    G++SD IWE IKDV +K+I+  E  + +L+K  +    SCHELFG DI+LD  LKPW+LEVNISPSLHS+S LD  IKGQ+++D+LN+ GF LP +  I +S  + +    +      ++  ++ +    +K K  +Y+ Q+  D     ++LD+LTPDDV I++E EDEFSR G FER+ P+     YL+F + PRY+N+L  +W ++Y  + ++   G+ L++S    G H+   SDS  V
Sbjct:  484 EARELDSSDRDI--SSATDLQPDQAETEDTEEELVDGLEDCCSRDENEEEEGDSECSSLSAVSPSESVAMISRSCMEILTKPLSNHEKVVRPALIYSLFPNVPPTIYFGTRDERVEKLPWEQRKLLRWKMSTVTPNIVKQTIGRSHFKISKRNDDWLGCWGHHMKSPSFRSIREHQKLNHFPGSFQIGRKDRLWRNLSRMQSRFGKKEFSFFPQSFILPQDAKLLRKAWE-SSSRQKWIVKPPASARGIGIQVIHKWSQLPKRRPLLVQRYLHKPYLISGSKFDLRIYVYVTSYDPLRIYLFSDGLVRFASCKYSPSMKSLGNKFMHLTNYSVNKKNAE-YQANAD--EMACQGHKWALKALWNYLSQKGVNSDAIWEKIKDVVVKTIISSEPYVTSLLKMYVRRPYSCHELFGFDIMLDENLKPWVLEVNISPSLHSSSPLDISIKGQMIRDLLNLAGFVLPNAEDIISSPSSCSSSTTSLPTSPGDKCRMAPEHVTAQKMKKAYYLTQKIPDQDFYASVLDVLTPDDVRILVEMEDEFSRRGQFERIFPSHISSRYLRFFEQPRYFNILTTQWEQKYHGNKLK---GVDLLRSWCYKGFHMGVVSDSAPV 1086

The following BLAST results are available for this feature:

BLAST of TCONS_00021186-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00021186-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TTLL4	2.652e-157	43.46	Tubulin polyglutamylase TTLL4 OS=Homo sapiens GN=T...	[more]

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TCONS_00021186-protein (polypeptide) - C. hemisphaerica