TCONS_00021165-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00021165-protein
Unique Name	TCONS_00021165-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	721

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00021165-protein ID=TCONS_00021165-protein|Name=TCONS_00021165-protein|organism=Clytia hemisphaerica|type=polypeptide|length=721bp
MAEEKKFFRRLFRKMERTNSVISDTLPVVTEESYYPDGADAFGDSVEPPA
GDMGNESINTNYALVESGKSSKYGAAKKRRSFLHSKQFRSFRSASLSVSM
LEKPSDDRKAHAFLAGWNVSNLIQGTGILGVPYAVQQGGWAAVAMIFIVA
ILCCHTGKLLIECMYEKSKKTGIKRRLRVNYPEVAEAVMGRKGLVILGII
QSVEMFGGVIMYVVLLGTVWADMFQKYTGLGMKEWAALNCCISLPTLFIT
KMSIVSWLSMLSVFSLMSALVTLIAFCFTQISVWSLVNVPPFDPQTFPVG
FGIIVFSYCAHAVFPSIEGSMRKPEQFNGMMNSSFLLAAIVKGALGTFMV
LTFGNLTEEVATVNLAAYPIWSKVATFLVIGNVLLAIPLGMFVVSLTFDD
AFLTYFPHLNRDXQSVEMFGGVIMYVVLLGTVWADMFQKYTGLGMKEWAA
LNCCISLPTLFITKMSIVSWLSMLSVFSLMSALVTLIAFCFTQISVWSLV
NVPPFDPQTFPVGFGIIVFSYCAHAVFPSIEGSMRKPEQFNGMMNSSFLL
AAIVKGALGTFMVLTFGNLTEEVATVNLAAYPIWSKVATFLVIGNVLLAI
PLGMFVVSLTFDDAFLTYFPHLNRDSKFHWVWLLITRPLLIAFALFLAIM
VPHFGLLMGVIGSLTGTCLCFLFPCYFHLKLRWNTLAKWEVAVDVAIMVF
GLIAGSLGFAFSTKALIMTYL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011862	XLOC_011862	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00021165	TCONS_00021165	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013057	AA_transpt_TM

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 111..394 e-value: 5.1E-43 score: 147.2 coord: 414..713 e-value: 5.1E-42 score: 143.9

Blast

[Close]

BLAST of TCONS_00021165-protein vs. Swiss-Prot (Human)
Match: VIAAT (Vesicular inhibitory amino acid transporter OS=Homo sapiens GN=SLC32A1 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.690e-45
Identity = 116/371 (31.27%), Postives = 193/371 (52.02%), Query Frame = 0

Query:  106 DDRKAHAFLAGWNVSNLIQGTGILGVPYAVQQGGWAAVAMIFIVAILCCHTGKLLIECMYEKSKKTGIKRRLRVNYPEVAEAVMGRK----GLVILGIIQSVEMFGGVIMYVVLLGTVWADMFQKYTGL--GMKEWAALNCCISLPTLFITKMSIVSWLSMLSVFSLMSALVTLIAFCFTQISVWSLVNVPPF-DPQTFPVGFGIIVFSYCAHAVFPSIEGSMRKPEQFNGMMNSSFLLAAIVKGALGTFMVLTFGNLTEEVATVNLAAYPIWSKVATFLVIGNVLLAIPLGMFVV-----SLTFDDAFLTYFPHLNRDXQSVEMFGGVIMYVVLLGTVWADMFQKYTGLGMKEWAALN---CCISLPTLF 461
            D  K  A+ AGWNV+N IQG  +LG+PYA+  GG+  + +I   A++CC+TGK+LI C+YE+++  G   R+R +Y  +A A    +    G  ++ + Q +E+    I+YVV+ G +   M+  + GL    K W+ +   + LP  F+  +  VS  S+L   +     + +IA+C ++   W+   V  + D + FP+  GIIVFSY +    PS+EG+M++P +F+ MMN + + A ++KG       LT+ + T+EV T NL    I + V  FLV    LL+ PL  F          F +    +FP        ++ +G  +   +++ T+   ++  +  L M    +L     C  LP+LF
Sbjct:  112 DKPKITAWEAGWNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENED-GEVVRVRDSYVAIANACCAPRFPTLGGRVVNVAQIIELVMTCILYVVVSGNL---MYNSFPGLPVSQKSWSIIATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYCLSRARDWAWEKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWADETKEVITDNLPG-SIRAVVNIFLV-AKALLSYPLPFFAAVEVLEKSLFQEGSRAFFPACYSGDGRLKSWGLTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLF 476

HSP 2 Score: 162.155 bits (409), Expect = 1.013e-42
Identity = 114/315 (36.19%), Postives = 161/315 (51.11%), Query Frame = 0

Query:  414 QSVEMFGGVIMYVVLLGTVWADMFQKYTGL--GMKEWAALNCCISLPTLFITKMSIVSWLSMLSVFSLMSALVTLIAFCFTQISVWSLVNVPPF-DPQTFPVGFGIIVFSYCAHAVFPSIEGSMRKPEQFNGMMNSSFLLAAIVKGALGTFMVLTFGNLTEEVATVNLAAYPIWSKVATFLVIGNVLLAIPLGMFVV-----SLTFDDAFLTYFPHLNRDSKFHWVWLLITRPLLIAFALFLAIMVPHFGLLMGVIGSLTGTCLCFLFPCYFHLKLRWNTLAKWEVAVDVAIMVFGLIAGSLGFAFSTKALIMTY 720
            Q +E+    I+YVV+ G +   M+  + GL    K W+ +   + LP  F+  +  VS  S+L   +     + +IA+C ++   W+   V  + D + FP+  GIIVFSY +    PS+EG+M++P +F+ MMN + + A ++KG       LT+ + T+EV T NL    I + V  FLV    LL+ PL  F          F +    +FP           W L  R  L+ F L +AI VPHF LLMG+ GSLTG  LCFL P  FHL+L W  L   +V  DVAI V G I    GF  S + LI  Y
Sbjct:  210 QIIELVMTCILYVVVSGNL---MYNSFPGLPVSQKSWSIIATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYCLSRARDWAWEKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWADETKEVITDNLPG-SIRAVVNIFLV-AKALLSYPLPFFAAVEVLEKSLFQEGSRAFFPACYSGDGRLKSWGLTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRLLWRKLLWHQVFFDVAIFVIGGICSVSGFVHSLEGLIEAY 519

The following BLAST results are available for this feature:

BLAST of TCONS_00021165-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00021165-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
VIAAT	1.690e-45	31.27	Vesicular inhibitory amino acid transporter OS=Hom...	[more]

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TCONS_00021165-protein (polypeptide) - C. hemisphaerica