TCONS_00020983-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020983-protein
Unique Name	TCONS_00020983-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	537

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020983-protein ID=TCONS_00020983-protein|Name=TCONS_00020983-protein|organism=Clytia hemisphaerica|type=polypeptide|length=537bp
MSKGHTQKEATYINKSLTFLEQTIISLQDKSRKHVPYRQSKLTHFLKDSL
GGKCYTTMIGNIWGEAEQLEETLSTLRFATRVMNIPSQPAVNSYQDPVKL
CQKYEKEITHLRKELAMYDTLTNRNQVNYEPLSDVQVQDIRHQVRKYLDN
DISEIEVLNLRQIQETFVQFKYFLDNMEKEGEKRLKEKYVVMGEKSVESN
DAVVDNVLIPAVERHGLVGENDGTTFSVGRVMNGAKQAHASPAVAARKRN
KKGKESTLDQERKCSANTGVSITASYNANETTKTSAEEPSSTSVNVDKQS
DGTPPSREEGFIMFKSDQGSSLNKIFLENKEILHEKKCSAKHLTEQINQT
KRDIDDTKAQLETAHQSKEYLKEKTSEGEIIMDENEFDLLRTLKTSKNIY
RENYEQLQKVRADIVYCEDLVKQCRRKLLTEFEQWYSESFPTKDQKEGAA
NNNTTAESAKNSPTKNTFQRFEDDGEKFDKIQKQALMKDPESIAFYNARL
QTERRKLYGGSAQPTQRPGSVTSSLRNAPPKTMMIHS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011768	XLOC_011768	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020983	TCONS_00020983	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001752	Kinesin_motor_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003777	microtubule motor activity
GO:0008017	microtubule binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 101..121
None	No IPR available	COILS	Coil	Coil	coord: 390..410
None	No IPR available	COILS	Coil	Coil	coord: 340..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 508..537
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..474
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..261
IPR001752	Kinesin motor domain	PFAM	PF00225	Kinesin	coord: 3..85 e-value: 1.8E-26 score: 92.8
IPR001752	Kinesin motor domain	GENE3D	3.40.850.10		coord: 1..99 e-value: 1.6E-31 score: 108.7
IPR001752	Kinesin motor domain	PROSITE	PS50067	KINESIN_MOTOR_2	coord: 1..85 score: 36.885
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..126

Blast

[Close]

BLAST of TCONS_00020983-protein vs. Swiss-Prot (Human)
Match: KIF9 (Kinesin-like protein KIF9 OS=Homo sapiens GN=KIF9 PE=1 SV=4)

HSP 1 Score: 340.502 bits (872), Expect = 4.645e-108
Identity = 203/525 (38.67%), Postives = 309/525 (58.86%), Query Frame = 0

Query:    2 SKGHTQKEATYINKSLTFLEQTIISLQDKSRKHVPYRQSKLTHFLKDSLGGKCYTTMIGNIWGEAEQLEETLSTLRFATRVMNIPSQPAVNSYQDPVKLCQKYEKEITHLRKELAMYDTLTNRNQVNYEPLSDVQVQDIRHQVRKYLDNDISEIEVLNLRQIQETFVQFKYFLDNMEKEGEKRLKEKYVVMGEKSVESNDAVVDNVLIPAVERHGLVGENDGTTFSVG--------RVMNGAKQAHASP-AVAARKRNKKGKESTLDQERKCSANTGVSITASYNAN------ETTKTSAEEP---SSTSVNVDKQSDGTPPSREEGFIMFKSDQGSSLNKIFLENKEILHEKKCSAKHLTEQINQTKRDIDDTKAQLETAHQSKEYLKEKTSEGEIIMDENEFDLLRTLKTSKNIYRENYEQLQKVRADIVYCEDLVKQCRRKLLTEFEQWYSESFPTKDQKEGAANNNTTAESAKNSPTKNTFQRFEDDGEKFDKIQKQALMKDPESIAFYNARLQTERRKLY 508
            S+G   KEATYINKSL+FLEQ II+L D+ R H+P+RQ KLTH LKDSLGG C   ++ NI+GEA QLEETLS+LRFA+R+  + ++PA+N   D  ++ +  EKE+  L++ELA++D+LTNR  V Y+P+ ++Q+ +I  QVR+YL+  + EI++++LRQI+E F QF+  L   E+E E  L+ KY ++      +  A+    L+  V+ H LVGE +G  F +G             +K+    P +  ARK       +  D +   ++ T + + +S + +         +TS+ EP    S    +      TPPS+   F  FK++QGS +N+IF ENK IL+E++  A   T+ IN  KR+ID TK  L      +E   +  ++G +I+DE EF L+  LK  K  YR  Y+ L+ +RA+I YC+ LV QCR +LL EF+ WY+ESF   +  + A     +       P        EDD +KF ++Q++ L + P+SI+FYNA+++ E++  Y
Sbjct:  257 SEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRMKLVTTEPAINEKYDAERMVKNLEKELALLKQELAIHDSLTNRTFVTYDPMDEIQIAEINSQVRRYLEGTLDEIDIISLRQIKEVFNQFRVVLSQQEQEVESTLRRKYTLIDRNDFAAISAIQKAGLV-DVDGH-LVGEPEGQNFGLGVAPFSTKPGKKAKSKKTFKEPLSSLARKEGASSPVNGKDLDYVSTSKTQL-VPSSKDGDVKDMLSRDRETSSIEPLPSDSPKEELRPIRPDTPPSKPVAFEEFKNEQGSEINRIFKENKSILNERRKRASETTQHINAIKREIDVTKEALNFQKSLREKQGKYENKGLMIIDEEEFLLILKLKDLKKQYRSEYQDLRDLRAEIQYCQHLVDQCRHRLLMEFDIWYNESFVIPEDMQMALKPGGSIRPGM-VPVNRIVSLGEDDQDKFSQLQQRVLPEGPDSISFYNAKVKIEQKHNY 777

The following BLAST results are available for this feature:

BLAST of TCONS_00020983-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020983-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KIF9	4.645e-108	38.67	Kinesin-like protein KIF9 OS=Homo sapiens GN=KIF9 ...	[more]

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TCONS_00020983-protein (polypeptide) - C. hemisphaerica