TCONS_00020679-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020679-protein
Unique NameTCONS_00020679-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length538

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020679-protein ID=TCONS_00020679-protein|Name=TCONS_00020679-protein|organism=Clytia hemisphaerica|type=polypeptide|length=538bp
MEEEDKSSSKKKNEASSSDDQSNSWWGGWGQGWIDSVKEKSASTLEMVKK
DLNEFVEVIQGDTSVAINETADKLDEHVQQKKENTTKEKDDLGDTMNTTE
LVTQGVKGLSKVLHSMSELMSIQEPDDSNEEFITLAEGSFSLQGYNRKQE
KLHMLQTDPGTYCNEPEGSFNDWLEVFSLDEHKEDMSNLLTQNSAVRAVY
SKLVPDVLSHTAFWQRYYFKVFELETEERKREELLERAKKSTTHDNGDES
DDGGWGDDDDDIEVVSTSIAATSTKQETNKEEIQKTPIKDDKNITKNKTT
PENITEPSALQMMSPPVQNMRDEPISSVEIPKLDLDEPKETHSFVVKDTK
PVEMSKPVSEAPKETVIPVDLDTKSEPKAMEKSCETIKDDKELEVEENFD
QINSVIPKKIKNNSDITRLTPELENTNKPSEISETASVSSWMSIDDQDNM
KVKKIKGEQTIKSENSRPVSDGGSSNSSGVLINKSEADDLDDDDDFDIDL
DEIDDVNDEELQKMVQNIKEKSANGGLEDEDDDWENWE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011599XLOC_011599Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020679TCONS_00020679Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005607BSD_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 224..244
NoneNo IPR availableCOILSCoilCoilcoord: 538..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 414..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 513..538
IPR005607BSD domainSMARTSM00751wurzfinal6coord: 173..225
e-value: 7.1E-7
score: 38.8
IPR005607BSD domainPFAMPF03909BSDcoord: 173..229
e-value: 9.4E-12
score: 44.7
IPR005607BSD domainGENE3D1.10.3970.10coord: 139..236
e-value: 4.6E-22
score: 78.0
IPR005607BSD domainPROSITEPS50858BSDcoord: 173..225
score: 15.406
IPR005607BSD domainSUPERFAMILY140383BSD domain-likecoord: 144..230

Blast
[Close]
BLAST of TCONS_00020679-protein vs. Swiss-Prot (Human)
Match: BSDC1 (BSD domain-containing protein 1 OS=Homo sapiens GN=BSDC1 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 6.125e-41
Identity = 81/223 (36.32%), Postives = 127/223 (56.95%), Query Frame = 0 
Query:   25 WWGGWGQGWIDSVKEKSASTLEMVKKDLNEFVEVIQGDTSVAINETADKLDEHVQQKKENTTKEKDDLGDTMNTTELVTQGVKGLSKVLHSMSELMSIQEPDDSNEEFITL-AEGSFSLQGYNRKQEKLHMLQTDPGTYCNEPEGS---FNDWLEVFSLDEHKEDMSNLLTQNSAVRAVYSKLVPDVLSHTAFWQRYYFKVFELETEERKREELLERAKKSTT 243
            WW  W Q    +VKEKS+  LE +K+DL EF +V+Q DT+  I  TA  + E +  +  +   EK                 KGLS  L  +S+  +       + + ITL    S + + Y+  + +L+ LQ+DP TYCNEP+G    F+ WL  F L+E K ++S LL  + ++RA+Y+K+VP  +SH+ FW RY++KV +LE E+ +R+ L +RA++S +
Sbjct:    9 WWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLATEGSSGATEKMK---------------KGLSDFLGVISDTFAPSPDKTIDCDVITLMGTPSGTAEPYDGTKARLYSLQSDPATYCNEPDGPPELFDAWLSQFCLEEKKGEISELLVGSPSIRALYTKMVPAAVSHSEFWHRYFYKVHQLEQEQARRDALKQRAEQSIS 216
The following BLAST results are available for this feature:
BLAST of TCONS_00020679-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BSDC16.125e-4136.32BSD domain-containing protein 1 OS=Homo sapiens GN... [more]
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