TCONS_00020641-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00020641-protein
Unique Name	TCONS_00020641-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	120

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00020641-protein ID=TCONS_00020641-protein|Name=TCONS_00020641-protein|organism=Clytia hemisphaerica|type=polypeptide|length=120bp
MATHYSANQYENAFAANRLQNYQVPNDFKEHPTARKGCTKIISNNRGHLL
DNVPRSKQSPWGTFKGTWDDHLGLQKNPAKETPSKETSNRLKSPSPEQNE
KSVVDEEVIQPTQHKEQIVE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011579	XLOC_011579	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00020641	TCONS_00020641	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..120

Blast

[Close]

BLAST of TCONS_00020641-protein vs. Swiss-Prot (Human)
Match: FLTOP (Protein Flattop OS=Homo sapiens GN=CFAP126 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.727e-23
Identity = 44/88 (50.00%), Postives = 62/88 (70.45%), Query Frame = 0

Query:    1 MATHYSANQYENAFAANRLQNYQVPNDFKEHPTARKGCTKIISNNRGHLLDNVPRSKQSPWGTFKGTWDDHLGLQKNPAKETPSKETS 88
            MAT+YSANQYE AF++  LQN+      KE  ++ +G T+II+N+RGHLL +VPRSK +PWG+F GTW   + L+  PA+ T +  T+
Sbjct:    1 MATNYSANQYEKAFSSKYLQNWSPTKPTKESISSHEGYTQIIANDRGHLLPSVPRSKANPWGSFMGTW--QMPLKIPPARVTLTSRTT 86

The following BLAST results are available for this feature:

BLAST of TCONS_00020641-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00020641-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FLTOP	2.727e-23	50.00	Protein Flattop OS=Homo sapiens GN=CFAP126 PE=2 SV...	[more]

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TCONS_00020641-protein (polypeptide) - C. hemisphaerica