TCONS_00020617-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020617-protein
Unique NameTCONS_00020617-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1044

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020617-protein ID=TCONS_00020617-protein|Name=TCONS_00020617-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1044bp
FRDEIYSQICKQLCQNPKKTSYTRGWVLLSLCLGCFAPSETFSKYLMNFI
QNGPDSTVTYCMKRLRRTMKNGTRHQPPSWLELQAVKYKRHLLLPITFMD
GNTKTLLADSATTSKELCEELAKKIDLKDQFGFSLYIALFDKVSSLGSGS
DHVMDAISQCEQYAKEQGAKEQNAPWRLFFRKEIFSPWHNPTIDSAGTNL
IYQQVIRGVKFGEYRCNSKEEFADIAAKQYYIEYKNDFKTSRVKSLLPNY
IPDSYLQNTKAYDMWCQLIATHHDKLVKNLFNEYNQICEQIKRKELPSDY
FIKKRNPQDALRVKEDIVYHAKFRWPLLFSRFYEAHRFSGPALPRDDVII
AVNWTGVYIVDSEERVLMECSFPELLAITGGNDKVPGQSFTLSTVKGLEY
TFTSSNAEDIRELISFFLEGLKKRSKYVVATQDYSSNSETSTILSLRKGD
LVYLEDGHGEDVITNGWCRGYSERTREHGDFPSECVYVLPTVEKPQRDVL
EMFFNQSNVNNNNTQGAYPASMEIDNIPIPERPHTLEEFSMQHFNPLPKR
TLSKTLNSIRKIRKDIPWAFTKEPIKQPLMKRLNDIEELNSKSIQTFLAI
MKYMGDYPSSKSVRKSTDLTDAMFEFPLLQEPLRDEVYCQIIKQLTDNPH
KLSEERGWELMWLLTGSFACSTRLQQDVKLFLKSKSGQWSIAGDCYIRLH
KTLRQGPRKYPPHLVEVEAVQEKTVRIFHKVYFPDDTNEAFEVESSTRAK
DFCDQIGKKLQIRSSEGFSLFVKIADKVISVPEADFFFDFVRHLIEWLKK
ARPISQRDGAALNMSYQVFFMKKLWTSTEIGRDPNADTIFHFHQELPKLL
RGYHKCTVEEAMTLAALQYKVRYGEDRSALQQITKHLERFVPSAMIASVQ
PIDKWREGIEYHYKNLSGRRKEECKVLFLKIIAKKTTFGSAFFEVRQTTD
PRYPDQLLIAINKNGVNLIDPNSKDLLVTYPFTKIFNWSSGNTFFHMTIG
NLVKGTKLLCETNLGYKMDDLLTSYISQMLSTMNKHKGTISFKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011573XLOC_011573Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020617TCONS_00020617Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR000857MyTH4_dom
IPR019749Band_41_domain
IPR011511SH3_2
IPR011993PH_dom-like
IPR019748FERM_central
IPR014352FERM/acyl-CoA-bd_prot_3-hlx
IPR018979FERM_N
IPR000299FERM_domain
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005856 cytoskeleton
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainSMARTSM00326SH3_2coord: 426..490
e-value: 6.1E-6
score: 35.7
IPR001452SH3 domainPROSITEPS50002SH3coord: 423..491
score: 10.142
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 426..495
IPR000857MyTH4 domainSMARTSM00139MyTH4_1coord: 570..721
e-value: 3.8E-48
score: 176.0
coord: 2..87
e-value: 3.7E-5
score: 5.2
IPR000857MyTH4 domainPFAMPF00784MyTH4coord: 619..719
e-value: 2.9E-26
score: 92.0
coord: 2..85
e-value: 6.0E-27
score: 94.2
IPR000857MyTH4 domainPROSITEPS51016MYTH4coord: 1..87
score: 40.378
IPR000857MyTH4 domainPROSITEPS51016MYTH4coord: 570..721
score: 55.237
IPR019749Band 4.1 domainSMARTSM00295B41_5coord: 723..943
e-value: 8.8E-42
score: 154.8
coord: 88..328
e-value: 3.3E-19
score: 79.8
IPR011511Variant SH3 domainPFAMPF07653SH3_2coord: 427..486
e-value: 6.2E-6
score: 25.7
IPR011993PH domain-likeGENE3D2.30.29.30coord: 328..425
e-value: 2.0E-30
score: 104.6
IPR011993PH domain-likeGENE3D2.30.29.30coord: 939..1036
e-value: 4.8E-31
score: 106.6
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 939..1029
IPR019748FERM central domainPFAMPF00373FERM_Mcoord: 193..276
e-value: 4.1E-5
score: 23.9
coord: 841..943
e-value: 9.4E-15
score: 55.0
IPR019748FERM central domainCDDcd14473FERM_B-lobecoord: 198..277
e-value: 2.10468E-8
score: 52.2486
IPR019748FERM central domainCDDcd14473FERM_B-lobecoord: 840..934
e-value: 2.72533E-14
score: 69.5826
IPR019748FERM central domainSUPERFAMILY47031Second domain of FERMcoord: 821..938
IPR019748FERM central domainSUPERFAMILY47031Second domain of FERMcoord: 181..276
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundleGENE3D1.20.80.10coord: 185..327
e-value: 1.5E-32
score: 112.1
coord: 825..938
e-value: 1.6E-16
score: 60.3
NoneNo IPR availableGENE3D3.10.20.90coord: 724..824
e-value: 5.5E-29
score: 100.2
coord: 89..184
e-value: 4.2E-28
score: 97.4
NoneNo IPR availableGENE3D2.30.30.40coord: 426..506
e-value: 3.5E-12
score: 45.4
NoneNo IPR availableCDDcd13199FERM_C2_MyoVIIcoord: 939..1034
e-value: 1.34541E-61
score: 204.028
NoneNo IPR availableCDDcd13198FERM_C1_MyoVIIcoord: 327..424
e-value: 2.56928E-45
score: 158.532
IPR018979FERM, N-terminalPFAMPF09379FERM_Ncoord: 731..805
e-value: 4.9E-5
score: 23.1
IPR000299FERM domainPROSITEPS50057FERM_3coord: 92..425
score: 30.733
IPR000299FERM domainPROSITEPS50057FERM_3coord: 727..1033
score: 46.213
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 91..189
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 722..826

Blast
BLAST of TCONS_00020617-protein vs. Swiss-Prot (Human)
Match: MYO7A (Unconventional myosin-VIIa OS=Homo sapiens GN=MYO7A PE=1 SV=2)

HSP 1 Score: 1222.22 bits (3161), Expect = 0.000e+0
Identity = 614/1084 (56.64%), Postives = 776/1084 (71.59%), Query Frame = 0
Query:    1 FRDEIYSQICKQLCQNPKKTSYTRGWVLLSLCLGCFAPSETFSKYLMNFIQNGPDSTVTYCMKRLRRTMKNGTRHQPPSWLELQAVKYKRHLLLPITFMDGNTKTLLADSATTSKELCEELAKKIDLKDQFGFSLYIALFDKVSSLGSGSDHVMDAISQCEQYAKEQGAKEQNAPWRLFFRKEIFSPWHNPTIDSAGTNLIYQQVIRGVKFGEYRCNSKEEFADIAAKQYYIEYKNDFKTSRVKSLLPNYIPDSYLQNTKAYDMWCQLIATHHDKLVKNLFNEYNQICEQIKRKELPSDYFIKKRNPQDALRVKEDIVYHAKFRWPLLFSRFYEAHRFSGPALPRDDVIIAVNWTGVYIVDSEERVLMECSFPELLAITGGND---------------------------------------KVPGQSFTLSTVKGLEYTFTSSNAEDIRELISFFLEGLKKRSKYVVATQDYSSNS-ETSTILSLRKGDLVYLEDGHGEDVITNGWCRGYSERTREHGDFPSECVYVLPTVEKPQRDVLEMFFNQSNVNNNNTQGAYPASMEIDNIPIPERPHTLEEFSMQHFNPLPKRTLSKTLNSIRKIR-KDIPWAFTKEPIKQPLMKRLNDIEELNSKSIQTFLAIMKYMGDYPSSKSVRKSTDLTDAMFEFPLLQEPLRDEVYCQIIKQLTDNPHKLSEERGWELMWLLTGSFACSTRLQQDVKLFLKSKSGQWSIAGDCYIRLHKTLRQGPRKYPPHLVEVEAVQEKTVRIFHKVYFPDDTNEAFEVESSTRAKDFCDQIGKKLQIRSSEGFSLFVKIADKVISVPEADFFFDFVRHLIEWLKKARPISQRDGAALNMSYQVFFMKKLWTSTEIGRDPNADTIFHFHQELPKLLRGYHKCTVEEAMTLAALQYKVRYGEDRSALQQITKHLERFVPSAMIASVQPIDKWREGIEYHYKNLSGRRKEECKVLFLKIIAKKTTFGSAFFEVRQTTDPRYPDQLLIAINKNGVNLIDPNSKDLLVTYPFTKIFNWSSGNTFFHMTIGNLVKGTKLLCETNLGYKMDDLLTSYISQMLSTMNKHKGTISFK 1043
             RDEIY QI KQL  NP K+SY RGW+L+SLC+GCFAPSE F KYL NFI  GP     YC +RLRRT  NGTR QPPSWLELQA K K+ ++LP+TFMDG TKTLL DSATT+KELC  LA KI LKD+FGFSLYIALFDKVSSLGSGSDHVMDAISQCEQYAKEQGA+E+NAPWRLFFRKE+F+PWH+P+ D+  TNLIYQQV+RGVKFGEYRC  +++ A++A++QY+++Y ++    R+ +L+P YIPD  +   K  + W QL    H K +                       + ++R   DA +VKED+V +A+F+WPLLFSRFYEA++FSGP+LP++DVI+AVNWTGVY VD +E+VL+E SFPE++A++   +                                       K    SFTL+T+KG EYTFTSSNAEDIR+L+  FLEGL+KRSKYVVA QD  + + E S  LS  KGDL+ L+   GE V+ +GW  G +ERT++ GDFP++ VYV+PTV  P R+++ +     +   +  +     + E +   +  +P+TLEEFS  +F P PK TLS+ +  + K R KD  W+ T+EP+KQ L+K+L   EEL+ ++   F+A++KYMGDYPS K  R   +LTD +FE PL  EPL+DE Y QI+KQLTDN  + SEERGWEL+WL TG F  S  L   V+ FL+S+     +A DC  RL K LR G RKYPPHLVEVEA+Q KT +IFHKVYFPDDT+EAFEVESST+AKDFC  I  +L ++SSEGFSLFVKIADKV+SVPE DFFFDFVRHL +W+KKARPI  +DG   +++YQVFFMKKLWT+T  G+DP AD+IFH++QELPK LRGYHKCT EE + L AL Y+V++ ED+S    I K L   VP  +I  V P D W+  I  ++   +G+ KEE K+ FLK+I K  TFGSAFFEV+QTT+P +P+ LLIAINK GV+LIDP +KD+L T+PFTKI NWSSGNT+FH+TIGNLV+G+KLLCET+LGYKMDDLLTSYISQML+ M+K +G+ S K
Sbjct: 1167 LRDEIYCQISKQLTHNPSKSSYARGWILVSLCVGCFAPSEKFVKYLRNFIHGGPPGYAPYCEERLRRTFVNGTRTQPPSWLELQATKSKKPIMLPVTFMDGTTKTLLTDSATTAKELCNALADKISLKDRFGFSLYIALFDKVSSLGSGSDHVMDAISQCEQYAKEQGAQERNAPWRLFFRKEVFTPWHSPSEDNVATNLIYQQVVRGVKFGEYRCEKEDDLAELASQQYFVDYGSEMILERLLNLVPTYIPDREITPLKTLEKWAQLAIAAHKKGI-----------------------YAQRRT--DAQKVKEDVVSYARFKWPLLFSRFYEAYKFSGPSLPKNDVIVAVNWTGVYFVDEQEQVLLELSFPEIMAVSSSRECRVWLSLGCSDLGCAAPHSGWAGLTPAGPCSPCWSCRGAKTTAPSFTLATIKGDEYTFTSSNAEDIRDLVVTFLEGLRKRSKYVVALQDNPNPAGEESGFLSFAKGDLIILDHDTGEQVMNSGWANGINERTKQRGDFPTDSVYVMPTVTMPPREIVALVTMTPDQRQDVVRLLQLRTAEPE---VRAKPYTLEEFSYDYFRPPPKHTLSRVM--VSKARGKDRLWSHTREPLKQALLKKLLGSEELSQEACLAFIAVLKYMGDYPS-KRTRSVNELTDQIFEGPLKAEPLKDEAYVQILKQLTDNHIRYSEERGWELLWLCTGLFPPSNILLPHVQRFLQSRK-HCPLAIDCLQRLQKALRNGSRKYPPHLVEVEAIQHKTTQIFHKVYFPDDTDEAFEVESSTKAKDFCQNIATRLLLKSSEGFSLFVKIADKVLSVPENDFFFDFVRHLTDWIKKARPI--KDGIVPSLTYQVFFMKKLWTTTVPGKDPMADSIFHYYQELPKYLRGYHKCTREEVLQLGALIYRVKFEEDKSYFPSIPKLLRELVPQDLIRQVSP-DDWKRSIVAYFNKHAGKSKEEAKLAFLKLIFKWPTFGSAFFEVKQTTEPNFPEILLIAINKYGVSLIDPKTKDILTTHPFTKISNWSSGNTYFHITIGNLVRGSKLLCETSLGYKMDDLLTSYISQMLTAMSKQRGSRSGK 2215          

HSP 2 Score: 145.976 bits (367), Expect = 3.955e-35
Identity = 105/371 (28.30%), Postives = 188/371 (50.67%), Query Frame = 0
Query:  628 LLQEPLRDEVYCQIIKQLTDNPHKLSEERGWELMWLLTGSFACSTRLQQDVKLFLKSKSGQWSIAGDCYIRLHKTLRQGPRKYPPHLVEVEAVQEKTVRIFHKVYFPDDTNEAFEVESSTRAKDFCDQIGKKLQIRSSEGFSLFVKIADKVISVPEADFFFDFVRHLIEWLKKARPISQRDGAA-LNMSYQVFFMKKLWTSTEIGRDPNADTIFHFHQELPKLLRGYHKCTVEEAMT-LAALQYKVRYGEDRSALQQITKHLERFVPSAMIASVQPIDKWRE-GIEYHYKNLSGRRKEECKVLFLKIIA----KKTTFGSAFFEVRQTTDPRYP-DQLLIAINKNGVNLIDPNSKDLLVTYPFTKIFNWSS 990
            +L+  LRDE+YCQI KQLT NP K S  RGW L+ L  G FA S +  + ++ F+    G    A  C  RL +T   G R  PP  +E++A + K   I   V F D T +    +S+T AK+ C+ +  K+ ++   GFSL++ + DKV S+           H+++ + +    ++  GA   N  +++FF K+++T      + N  T   + Q +  +  G ++C  E+ +  LA+ QY V YG +   L+++   +  ++P   I  ++ ++KW +  I  H K +  +R+ + + +   +++    K     S F+E  + + P  P + +++A+N  GV  +D   + +L+   F +I   SS
Sbjct: 1162 ILRPALRDEIYCQISKQLTHNPSKSSYARGWILVSLCVGCFAPSEKFVKYLRNFI--HGGPPGYAPYCEERLRRTFVNGTRTQPPSWLELQATKSKKP-IMLPVTFMDGTTKTLLTDSATTAKELCNALADKISLKDRFGFSLYIALFDKVSSLGSGS------DHVMDAISQCEQYAKEQGAQERNAPWRLFFRKEVFTPWHSPSEDNVATNLIYQQVVRGVKFGEYRCEKEDDLAELASQQYFVDYGSE-MILERLLNLVPTYIPDREITPLKTLEKWAQLAIAAHKKGIYAQRRTDAQKVKEDVVSYARFKWPLLFSRFYEAYKFSGPSLPKNDVIVAVNWTGVYFVD-EQEQVLLELSFPEIMAVSS 1521          
The following BLAST results are available for this feature:
BLAST of TCONS_00020617-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYO7A3.955e-3556.64Unconventional myosin-VIIa OS=Homo sapiens GN=MYO7... [more]
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