TCONS_00020582-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020582-protein
Unique NameTCONS_00020582-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length238

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020582-protein ID=TCONS_00020582-protein|Name=TCONS_00020582-protein|organism=Clytia hemisphaerica|type=polypeptide|length=238bp
ISDLSNYLVSSEGEMLAYAIHENIDCRDWLERGYNQSGVYWIYHNRYKFK
VFCEMLPQWGTAWICLQTRFDGSVDFNRNWEDYKNGFGNVDGEHWLGLEN
IHKLTHGRHMEIKIEAYTFEGSRNWVNFFNFSIENESNYYRLNAGVKDRG
NFEADWLSMDGMEFSTADVDRDLVENVNCAVDFPSGWWHAGCFMMNLNGV
YRNTPTLPSSAQGIVWKSWKTWYVSLKKASMMIRRPSL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011555XLOC_011555Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020582TCONS_00020582Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 21..236
e-value: 8.4E-51
score: 184.8
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 25..234
e-value: 3.0E-52
score: 177.5
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 17..237
score: 42.811
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 25..235
e-value: 2.35978E-68
score: 210.945
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 24..235
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 6..164
e-value: 3.7E-47
score: 160.3
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 165..227
e-value: 2.8E-20
score: 71.7

Blast
[Close]
BLAST of TCONS_00020582-protein vs. Swiss-Prot (Human)
Match: MFAP4 (Microfibril-associated glycoprotein 4 OS=Homo sapiens GN=MFAP4 PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.766e-44
Identity = 91/227 (40.09%), Postives = 118/227 (51.98%), Query Frame = 0 
Query:   18 YAIHENIDCRDWLERGYNQSGVYWIYHN--RYKFKVFCEMLPQWGTAWICLQTRFDGSVDFNRNWEDYKNGFGNVDGEHWLGLENIHKLTHGRHMEIKIEAYTFEGSRNWVNFFNFSIE------NESNYYRLNAGVKDRGNFEADWLSM-DGMEFSTADVDRDLVENVNCAVDFPSGWWHAGCFMMNLNGVYRNTPTLPSSAQGIVWKSWKTWYVSLKKASMMIRR 235
            + + + +DC D   +GY   GVY IY +       VFC+M  + G  W   Q RF+GSV F R W DYK GFG  DGE+WLGL+N+H LT  +  E++++   FE +  +  + +FSI        E  Y    AG +D G    D LS   G +FST D D+DL    NCA      +W   C   NLNG Y     L S A GI W  WK +Y SLK+  M IRR
Sbjct:   33 FCLQQPLDCDDIYAQGYQSDGVYLIYPSGPSVPVPVFCDMTTE-GGKWTVFQKRFNGSVSFFRGWNDYKLGFGRADGEYWLGLQNMHLLTLKQKYELRVDLEDFENNTAYAKYADFSISPNAVSAEEDGYTLFVAGFEDGG--AGDSLSYHSGQKFSTFDRDQDLFVQ-NCAALSSGAFWFRSCHFANLNGFYLGGSHL-SYANGINWAQWKGFYYSLKRTEMKIRR 254
The following BLAST results are available for this feature:
BLAST of TCONS_00020582-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MFAP41.766e-4440.09Microfibril-associated glycoprotein 4 OS=Homo sapi... [more]
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