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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00020424-protein ID=TCONS_00020424-protein|Name=TCONS_00020424-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1164bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00020424-protein vs. Swiss-Prot (Human)
Match: CAC1S (Voltage-dependent L-type calcium channel subunit alpha-1S OS=Homo sapiens GN=CACNA1S PE=1 SV=4) HSP 1 Score: 808.135 bits (2086), Expect = 0.000e+0 Identity = 465/1152 (40.36%), Postives = 697/1152 (60.50%), Query Frame = 0
Query: 11 NNAFRVKLKSFMLSKFMFWFIVSAVFLNSLFGAIQHYRQPQWITDVTSITDNLFLGIFVSEMCLKLYAVGPNAYFQSKFNKFDFSVVVMGLINLFLSKMFNIN-LGIPVLRQLRLMRLFKFTKYYKKMKNLVQSIINSMAAIVSLLVLLFLFLMIFALLGMNIFGGQFYAREHIGKPFSRTNFDDFFNAMLAVFQIITGEDWNFVMYEGIVAYGGPRSPVGLAVSLYFVGVTVLGNYVLLNVFLAIAVDNISLDDDEEKAEEEAEEE--RADAQQAVKDKYAPPSA--------RSNGE-IETASQ---DRFAEADRQVIGEYGSTAPPGHHAPGDNFLENLKDPSRMTGNIPTFVNAEEQTV-----NTLFIFPPDGIVRRIIHPIVTSPHFDNFILALILISSALLALENPTNPDADINKILNLTDYFFTTVFALEVLLKVVNFGFALHPNSYCRDTWNCADMFVVSCAITSLVLSQDKNASTTVKSIVKILRILRVLRPLKSINKLQELKAVFQCMVFSLQNVVNVLIITVQFLLIFSMMGVQLFNGKLFQCNDPSKEFEDECQGYYITFDKENYNRPIQVK---REWSLIDWNFNHLGIALTTLFSSATGEGWPAVMQTGIDSQLENQGPLLNNKIWIAIYFIVFVVIFSFFFINVFVGLIILTFQNLQIDP--NAALDRNTKNSFDFVMRSKPMERFMPEDVKSWQYKAWALVESSQWEILISVLIALNTVVLMMEFADQPDWYSNILGMIGDVFTFVFTFEFALKMFALGC-NYFKDFWNNFDMFIVLGSILDFMIKKIL--------------------PPGTVPFDTSSLRLFRALRLIKLLRRFRDLRILLWTFLQSFKALPYVCMLIFLLFFVYGIIGMQIFSSIDKDSEDDPWNQINRNNHFSTYFSSTQVLFRVATGENWPNIMLACTSGAKCDQKLRSVQIDNMQDCGSPIAYVYFISFVFFCSFLMLNLFIAVIMDNFAFLTEDSSILGPHHLDEFVTVWSDFDPRASGRIQHTEVCELLRQMLPPVGLGLKCPKTVAYKRLVQMNMRYYRDGTVDYTGTFFALVRTGLKVATQDANLKKTDQEFKNMLKKQIK-VPKRTLDMIIPRVPRNAKHMTIAKIYTAKLIWENYKNMKKAQQ 1115
N FR K + SK +W ++ V LN+L A +H+ QP W+T + I + + L +F +EM +K+Y +G YF S FN+FD VV G++ + L + + LGI VLR +RL+R+FK TKY+ + NLV S++NS+ +I SLL+LLFLF++IFALLGM +FGG++ + R+NFD+F A+++VFQ++TGEDW +MY GI+AYGGP P G+ V +YF+ + V GNY+LLNVFLAIAVDN++ + A++ EE R + + DK + + GE I T ++ D F +V Y P PGD+ + + P + +E+ V ++ FIF P +R + H IV + F NFIL IL+SSA LA E+P D+ N+IL D FT+VF +E++LK+ +G LH S+CR+ +N D+ VV+ ++ S+ L ++ S+VKILR+LRVLRPL++IN+ + LK V QCM ++ + N++++T +F+ +GVQLF GK F+C D SK E+EC+GYY + + P+Q++ REW D++F+++ A+ +LF+ +T EGWP ++ IDS E+ GP+ NN++ +AI+FI+++++ +FF +N+FVG +I+TFQ N LD+N + + ++++P+ ++P++ +QY+ W +V SS +E L+ LI LNT+ L M+ +Q + ++I ++ FT +FT E LK+ A YF D WN FD IV+GSI+D ++ +I P + ++ RLFR +RLIKLL R +R LLWTF++SF+ALPYV +LI +LFF+Y +IGMQ+F I QINRNN+F T+ + +LFR ATGE W I+LAC+ G CD + + CG+ AY YFISF C+FL++NLF+AVIMDNF +LT D SILGPHHLDEF +W+++DP A GRI+H +V LLR++ PP+G G CP VA KRLV MNM DGTV + T FALVRT LK+ T+ N ++ ++E + ++KK K + LD +IP P +T+ K Y LI E+++ K Q+
Sbjct: 418 NRIFRWKCHDIVKSKVFYWLVILIVALNTLSIASEHHNQPLWLTRLQDIANRVLLSLFTTEMLMKMYGLGLRQYFMSIFNRFDCFVVCSGILEILLVESGAMTPLGISVLRCIRLLRIFKITKYWTSLSNLVASLLNSIRSIASLLLLLFLFIVIFALLGMQLFGGRYDFED---TEVRRSNFDNFPQALISVFQVLTGEDWTSMMYNGIMAYGGPSYP-GMLVCIYFIILFVCGNYILLNVFLAIAVDNLAEAESLTSAQKAKAEEKKRRKMSKGLPDKSEEEKSTMAKKLEQKPKGEGIPTTAKLKIDEFESNVNEVKDPY-----PSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPIPEASSFFIFSPTNKIRVLCHRIVNATWFTNFILLFILLSSAALAAEDPIRADSMRNQILKHFDIGFTSVFTVEIVLKMTTYGAFLHKGSFCRNYFNMLDLLVVAVSLISMGLE------SSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCMFVAISTIGNIVLVTTLLQFMFACIGVQLFKGKFFRCTDLSKMTEEECRGYYYVYKDGD---PMQIELRHREWVHSDFHFDNVLSAMMSLFTVSTFEGWPQLLYKAIDSNAEDVGPIYNNRVEMAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGETEYKNCELDKNQRQCVQYALKARPLRCYIPKN--PYQYQVWYIVTSSYFEYLMFALIMLNTICLGMQHYNQSEQMNHISDILNVAFTIIFTLEMILKLMAFKARGYFGDPWNVFDFLIVIGSIIDVILSEIDTFLASSGGLYCLGGGCGNVDPDESARISSAFFRLFRVMRLIKLLSRAEGVRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIALVD----GTQINRNNNFQTFPQAVLLLFRCATGEAWQEILLACSYGKLCDPESDYAPGEEYT-CGTNFAYYYFISFYMLCAFLVINLFVAVIMDNFDYLTRDWSILGPHHLDEFKAIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFCPHRVACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTE-GNFEQANEELRAIIKKIWKRTSMKLLDQVIP--PIGDDEVTVGKFYATFLIQEHFRKFMKRQE 1541 HSP 2 Score: 177.563 bits (449), Expect = 8.970e-45 Identity = 160/675 (23.70%), Postives = 302/675 (44.74%), Query Frame = 0
Query: 359 NTLFIFPPDGIVRRIIHPIVTSPHFDNFILALILISSALLA--LENPTNPDADINKILNLTDYFFTTVFALEVLLKVVNFGFALHPNSYCRDTWNCADMFVVSCAITSLVLS-----QDKNASTTVKSI---VKILRILRVLRPLKSINKLQELKAVFQCMVFSLQNVVNVLIITVQFLLIFSMMGVQLFNGKL-----FQCNDPSKEFEDECQGYYITFDKENYNRPIQVKREWSLIDW--------NFNHLGIALTTLFSSATGEGWPAVMQTGIDSQLENQGPLLNNKIWIAIYFIVFVVIFSFFFINVFVGLII-------------LTFQNLQIDPNAALDRNTKNSFDFVMRSKPM--ERFMPED-------------------------VKSW-------QYKAWALVESSQWEILISVLIALNTVVLMMEFADQPDWYSNILGMIGDVFTFVFTFEFALKMFALGC-NYFKDFWNNFDMFIVLGSILDFMIKKILPPGTVPFDTSSLRLFRALRLIKLLRRFRDLRILLWTFLQSFKALPYVCMLIFLLFFVYGIIGMQIFSSIDKDSEDDPWNQINRNNHFSTYFSSTQVLFRVATGENWPNIMLACTSGAKCDQKLRSVQIDNMQDCGSP-----IAYVYFISFVFFCSFLMLNLFIAVIMDNFA 957
LF + +R+ IV F+ IL I + LA L P + + +N L +YFF VF++E +K++ +GF H ++Y R WN D +V + +++L Q A + K VK LR RVLRPL+ ++ + L+ V + ++ + ++ ++ + ++I++++G++LF GK+ F D E+E + R + W +F++ G ++ T++ T EGW V+ ++ + N+ W IYF+ +++ SFF +N+ +G++ TFQ L+ LD + + ++ + + M E F ++ W ++K +V+S + L+ +++ALNT+ + E +QP W + + + V +FT E +KM+ LG YF +N FD F+V IL+ ++ + P S LR R LR+ K+ + + L L+ + L S +++ + +L+FL ++ ++GMQ+F D ED ++ R+N F + + +F+V TGE+W ++M + + G P + +YFI ++++LN+F+A+ +DN A
Sbjct: 29 RALFCLTLENPLRKACISIVEWKPFETIILLTIFANCVALAVYLPMPEDDNNSLNLGLEKLEYFFLIVFSIEAAMKIIAYGFLFHQDAYLRSGWNVLDFTIVFLGVFTVILEQVNVIQSHTAPMSSKGAGLDVKALRAFRVLRPLRLVSGVPSLQVVLNSIFKAMLPLFHIALLVLFMVIIYAIIGLELFKGKMHKTCYFIGTDIVATVENEEPS---PCARTGSGRRCTINGSECRGGWPGPNHGITHFDNFGFSMLTVYQCITMEGWTDVLY-WVNDAIGNE--------WPWIYFVTLILLGSFFILNLVLGVLSGEFTKEREKAKSRGTFQKLR--EKQQLDEDLRGYMSWITQGEVMDVEDFREGKLSLDEGGSDTESLYEIAGLNKIIQFIRHWRQWNRIFRWKCHDIVKSKVFYWLVILIVALNTLSIASEHHNQPLWLTRLQDIANRVLLSLFTTEMLMKMYGLGLRQYFMSIFNRFDCFVVCSGILEILL--VESGAMTPLGISVLRCIRLLRIFKITKYWTSLSNLVASLLNSIRSIASLLLLLFLFIVIFALLGMQLFGG-RYDFED---TEVRRSN-FDNFPQALISVFQVLTGEDWTSMMY-----------------NGIMAYGGPSYPGMLVCIYFIILFVCGNYILLNVFLAIAVDNLA 665 HSP 3 Score: 125.176 bits (313), Expect = 8.916e-29 Identity = 144/644 (22.36%), Postives = 278/644 (43.17%), Query Frame = 0
Query: 64 FLGIFVSEMCLKLYAVG----PNAYFQSKFNKFDFSVVVMGLINLFLSKMFNI------------NLGIPVLRQLRLMRLFKFTKYYKKMKNLVQSIINSMAAIVSLLVLLFLFLMIFALLGMNIFGGQFYAREH-IG------------KPFSRT-------------------------NFDDFFNAMLAVFQIITGEDWNFVMYEGIVAYGGPRSPVGLAVSLYFVGVTVLGNYVLLNVFLAIAVDNISLDDDEEKAEEEAEEERADAQQAVKDKYAPPSARSNGEIETASQDRFAEADRQVIGEYGSTAPPGHHAPGDNFLENLKDPSRMTGNIPTFVNAEEQTVNTLFIFPPDGIVRRIIHPIVTSPHFDNFILALILISSALLALENPTNPDADINKILNLTDYFFTTVFALEVLLKVVNFGFALHPNSYCRDTWNCADMFVVSCAITSLVLSQDKNASTTVKSIVKILRILRVLRPLKSINKLQELKAVFQCMVFSLQNVVNVLIITVQFLLIFSMMGVQLFNGKLFQCNDPSKEFEDECQGYYITFDKENYNRPIQVKREWSLIDWNFNHLGIALTTLFSSATGEGWPAVMQTGIDSQLENQGPLLNNKIWIAIYFIVFVVIFSFFFINVFVGLII 653
FL +F E +K+ A G +AY +S +N DF++V +G+ + L ++ I L + LR R++R + ++ ++ SI +M + + +L+ ++I+A++G+ +F G+ + + IG P +RT +FD+F +ML V+Q IT E W V+Y A G +YFV + +LG++ +LN+ L + + + ++ K+ ++ R + QQ +D S + GE+ R + + E GS + G N I F+ Q + I R H IV S F ++ ++ +++ +A E+ P + ++ ++ + ++F E+L+K+ G Y +N D FVV I ++L + + S+++ +R+LR+ + K L L A ++ S++++ ++L++ F++IF+++G+QLF G+ +FED +V+R NF++ AL ++F TGE W ++M GI + GP + + IYFI+ V ++ +NVF+ + +
Sbjct: 93 FLIVFSIEAAMKIIAYGFLFHQDAYLRSGWNVLDFTIVFLGVFTVILEQVNVIQSHTAPMSSKGAGLDVKALRAFRVLRPLRLVSGVPSLQVVLNSIFKAMLPLFHIALLVLFMVIIYAIIGLELFKGKMHKTCYFIGTDIVATVENEEPSPCARTGSGRRCTINGSECRGGWPGPNHGITHFDNFGFSMLTVYQCITMEGWTDVLYWVNDAIGNEWP------WIYFVTLILLGSFFILNLVLGVLSGEFTKEREKAKSRGTFQKLR-EKQQLDEDLRGYMSWITQGEVMDVEDFR---EGKLSLDEGGSDTESLYEIAGLN-------------KIIQFIRHWRQW---------NRIFRWKCHDIVKSKVFYWLVILIVALNTLSIASEHHNQP-LWLTRLQDIANRVLLSLFTTEMLMKMYGLGL----RQYFMSIFNRFDCFVVCSGILEILLVESGAMTPLGISVLRCIRLLRIFKITKYWTSLSNLVA---SLLNSIRSIASLLLLLFLFIVIFALLGMQLFGGRY--------DFED-----------------TEVRRS------NFDNFPQALISVFQVLTGEDWTSMMYNGI---MAYGGPSYPGML-VCIYFIILFVCGNYILLNVFLAIAV 661 HSP 4 Score: 90.5077 bits (223), Expect = 3.955e-18 Identity = 70/287 (24.39%), Postives = 133/287 (46.34%), Query Frame = 0
Query: 9 VKNNAFRVKLKSFMLSKFMFWFIVSAVFLNSLFGAIQHYRQPQWITDVTSITDNLFLGIFVSEMCLKLYAVGPNAYFQSKFNKFDFSVVVMGLINLFLSKM-----------------FNIN------LGIPVLRQLRLMRLFKFTKYYKKMKNLVQSIINSMAAIVSLLVLLFLFLMIFALLGMNIFGGQFYAREHIGKPFSR-TNFDDFFNAMLAVFQIITGEDWNFVMYEGIVAYG-----------GPRSPVGLAVS-LYFVGVTVLGNYVLLNVFLAIAVDN 259
+ N ++ ++ + S + + + + + LN++ +QHY Q + + ++ I + F IF EM LKL A YF +N FDF +V+ +I++ LS++ N++ + R R+MRL K + ++ L+ + I S A+ + +L+ + I+A++GM +FG G +R NF F A+L +F+ TGE W ++ +YG G G + YF+ +L ++++N+F+A+ +DN
Sbjct: 1102 IPKNPYQYQVWYIVTSSYFEYLMFALIMLNTICLGMQHYNQSEQMNHISDILNVAFTIIFTLEMILKLMAFKARGYFGDPWNVFDFLIVIGSIIDVILSEIDTFLASSGGLYCLGGGCGNVDPDESARISSAFFRLFRVMRLIKLLSRAEGVRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIALVD---GTQINRNNNFQTFPQAVLLLFRCATGEAWQEILLA--CSYGKLCDPESDYAPGEEYTCGTNFAYYYFISFYMLCAFLVINLFVAVIMDN 1383 The following BLAST results are available for this feature:
BLAST of TCONS_00020424-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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