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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00020411-protein ID=TCONS_00020411-protein|Name=TCONS_00020411-protein|organism=Clytia hemisphaerica|type=polypeptide|length=599bp
MFRYFVYMSVYFSSFDWSIQRHIVVASITTQSTTNTPWNTEGCDVDWYRF
KESCYLPYKQEQYHNDASKICQKHSATLATIMDEQENQFIKALANQFLSY
GESWLGLVRSERLGTTFTWADGQQVSYERWMFNKPSIGDGDCVQLISSGF
WTNINCYNRFSFICKKDKNLPPAEDNLDLILNISIPLSCVFIMFCFVAFL
CFKSYKELQEIKQDNLDGKPFELIQAAMILPITKTPDLLTSNGKNLWKSA
LERLKAEQIKNNPLNEPHTFLARGSLSSIVDAARKNGQIGGNRAANMNTD
NSFADIVNSLMSKRRDTTFQGGLMGFPIIENPNVPKIAVDSPEHDKLNKD
ISQSTNNSRQETDPNFDFSSNASTESLDSNHNPKPRDQSYSSDDNSADEN
TDTLKNHQSKSYKSNSKRFVEVVVELYDVHEKLKHKTTTSVKRRESHGNG
CPNPNHEKRNYRPDNKRNSVNSIQDTKCKRESVNCTPDTKRVSLNSKPND
HRDSVFYRPDIVPNTTKPRPSQNSTSSIGTSDSNSSLSNDGTNSDILSTK
QFRDSIRKESEKRKEQYFPNSPEKKLPPVDYNSIPFKSNVADYTTVTLV Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001304 | C-type lectin-like | SMART | SM00034 | CLECT_2 | coord: 43..165
e-value: 2.6E-26
score: 103.4 |
| IPR001304 | C-type lectin-like | PFAM | PF00059 | Lectin_C | coord: 64..166
e-value: 1.5E-18
score: 67.4 |
| IPR001304 | C-type lectin-like | PROSITE | PS50041 | C_TYPE_LECTIN_2 | coord: 50..165
score: 21.056 |
| IPR016186 | C-type lectin-like/link domain | GENE3D | 3.10.100.10 | | coord: 18..172
e-value: 9.8E-33
score: 112.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 346..414 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 434..552 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 557..576 |
| None | No IPR available | CDD | cd00037 | CLECT | coord: 53..166
e-value: 9.86698E-24
score: 95.7645 |
| IPR016187 | C-type lectin fold | SUPERFAMILY | 56436 | C-type lectin-like | coord: 18..169 |
Blast
The following BLAST results are available for this feature:
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