TCONS_00020198-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020198-protein
Unique NameTCONS_00020198-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length444

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020198-protein ID=TCONS_00020198-protein|Name=TCONS_00020198-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
MHSDETFADDKNNHKYQFYNLRKQILIPESSHYSTQPIHCRFAAGCTELV
ISNFGEGNVGIYECYVKPIGRPLVKTNNYQSEEPNPNKALIDFRIFDSVE
CGNAEPKQGIVWTVNDQILVLDSDLVMDNVNXTVNDQILVLDSDLVMDNV
NTLYKPQGLDVLEFHNISEIQNGIYKCFLRQSGALLSVYNVVLKPASVYV
NKTEEKLGQLFKVICHFPNLEPELVYLTRGTEIYYYDGINNVNDYSRYRG
HLNEEDYFLEVDYLDLSPGDVGNYTCHVQLGGIYKEEKRILSASISIDLE
SVAAPLQPNQGMEIQIQCKVPESTTQGENYKLFWFKDDQLINNGNKTLFK
EETYKVVSTNDSLAIKNILPSDNGVYKCYFRGIKFQEFTINVIPPPVIET
TFFSNLNGQNGYWLGAGIAILIVGLLIFALWLTRLQKVKPLKKH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011343XLOC_011343Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020198TCONS_00020198Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013106Ig_V-set
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 303..393
e-value: 4.4E-4
score: 29.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 293..397
e-value: 1.2E-10
score: 41.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 199..288
e-value: 0.0024
score: 17.8
IPR013106Immunoglobulin V-set domainPFAMPF07686V-setcoord: 306..380
e-value: 3.4E-6
score: 27.1
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 310..391
score: 9.228
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 310..398
NoneNo IPR availableCDDcd00096Igcoord: 314..381
e-value: 8.40096E-5
score: 39.3947

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020198-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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