TCONS_00020001-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020001-protein
Unique NameTCONS_00020001-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length404

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020001-protein ID=TCONS_00020001-protein|Name=TCONS_00020001-protein|organism=Clytia hemisphaerica|type=polypeptide|length=404bp
FEEDDSHLFDLPAVGFEDKMVGIIGNMIGTDNKHQKMLALVLMAAAGLFL
TLGNSLVQFVYMKNPGLHISSFEVLFVRSLIQFVFTVIFMVHGKVHPYGS
EKKNIWSLCIMGIIEAAAIVLVYLALEKIPVGDATVIQFTAPVFTMIFSF
CITKKCCGWVDGIFGTVSFVGVILIAKPSIIEGNKTSIYFHHQHKVPHSQ
SMINTLSTDYIVGASFALLAAICLSWFYILNKMNGKKTDVTLTIFYPSIF
GMIIAPIAMGIKGEHVVTTELNSLSWGLLFVVGFVAFIGLMFMAEALQLE
NPGPAVLVRNMDVIYAFLFQYIFVHHPPGLSALIGTIIVLSCTSIIAINR
IFNWDKNCYNNDEEAMTDDRXRNLPTTNQTNSKKTILIFLIFLLLGLRTK
WLEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011233XLOC_011233Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020001TCONS_00020001Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000620EamA domainPFAMPF00892EamAcoord: 57..175
e-value: 3.8E-12
score: 46.5
coord: 213..343
e-value: 1.8E-9
score: 37.8
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 78..179
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 276..348

Blast
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BLAST of TCONS_00020001-protein vs. Swiss-Prot (Human)
Match: S35G1 (Solute carrier family 35 member G1 OS=Homo sapiens GN=SLC35G1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 9.889e-22
Identity = 86/291 (29.55%), Postives = 155/291 (53.26%), Query Frame = 0 
Query:   68 HISSFEVLFVRSLIQFVFTVIFMVHGKVHPYGSEKKNIWSLCIMGIIEAAAIVLVYLALEKIPVGDATVIQFTAPVFTMIFSF-CITKKCCGWVDGIFGTVSFVGVILIAKPSIIEGNKTSIYFHHQHKVPHSQSMINTLSTDYIVGASFALLAAICLSWFYILNKMNGKKTDVTLTIFYPSIFGMIIAPIAMGIKGEHVVT-TELNSLSWGLLFVVGFVAFIGLMFMAEALQLENPGPAVLVRNMDVIYAFLFQYIFVHHPPGLSALIGTIIVLSCTSIIAINRIFNWDK 356
             + + E+   R + Q +  +  +++ K    G + + I+ L + G++ + A++L+Y A + + + DATVI F++PVFT IF++ C+ +K   W D +F   +  GVILI +P  + G+ TS       +  +S  +  T +    +G+  A+ AA   S   IL KM GK  D  L+I+Y  + G++ + I + + GE  +    L+ L    L  +G     G +F+ +ALQ+E  GP  +++ MDV++AF+FQ IF ++ P    + G + V++     AI + +   K
Sbjct:   94 DVHAVEISAFRCVFQMLVVIPCLIYRKTGFIGPKGQRIF-LILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKEKYSPW-DALFTVFTITGVILIVRPPFLFGSDTS-----GMEESYSGHLKGTFAA---IGS--AVFAA---STLVILRKM-GKSVDYFLSIWYYVVLGLVESVIILSVLGEWSLPYCGLDRL---FLIFIGLFGLGGQIFITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNNVPTWWTVGGALCVVASNVGAAIRKWYQSSK 365
The following BLAST results are available for this feature:
BLAST of TCONS_00020001-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S35G19.889e-2229.55Solute carrier family 35 member G1 OS=Homo sapiens... [more]
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