TCONS_00019953-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019953-protein
Unique NameTCONS_00019953-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length993

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019953-protein ID=TCONS_00019953-protein|Name=TCONS_00019953-protein|organism=Clytia hemisphaerica|type=polypeptide|length=993bp
MAAAASPINNFLAKQIGVRVIRGPDWKWGKQDGGEGHVGTVRSFESHEEV
VVVWDNGTAANYRCSGAYDLRIFDSGPAGIKHDGTQCCECQSNPIYGTLW
KCVECTEEMCSTCYHNDRHNLRHRFHQLVAPGSNKVLVEPRRKSKKITAR
GMFPGSRVIRGVDWHWESQDGVAGRRGKITEIQDWSLLLPRSAAYVVWDT
GAKNLYRLGSEGMVDLKCVSDAKGPPFYRDHLPMLGEMSVKRTYNWQVAD
YVRVDLELEVVQSLQFGHGGWAYGMEEALGNSVGIISGFDDDGDVVVSYP
SGNRWTFNPAVLSKVNDLPSLDSDSLVVQSLASMSLDEAEDGQRPSRGSR
TGPFVEGDVVQILNNRDRVKLLQEGHGEWTDAMNETLGKIGSVTQVYQDG
DLKVEVNGTSWTFNRKCVVRIGSHRQLHSDEAKSLLKKLFEGHSSKEPSE
LLVKAAAEGNLKQINELFKTRAAKVDEVFAGHTALQAACQNGQVEAIKLL
LEMQADTEIQDKDGDRAIHHATFCDKETPIRLLIEAGADICSRNKRRQSA
LHVAVNKGHLKSIETLLELNIHANLQDSEGDTALHDAITKKRDDVVAMLL
EQGADISMTNYNGFNAVHHAALRGSAKAIEMLLRKNEKPWVINEQKDDGY
TPLHLASLNNHLDVVQLLIKLGGANKDYQSTSLQTPLHLAIQKQHADIVR
FLVLEGAKLSLQDKDGDTPLHEALQYHTLAQLKEIHDVDDVQTLITNFGQ
PNTTKQPTNSALIACFLVAHGADLNVENAKGLKPIDLCPDSDLEKILQKC
HKEYLSTSKAAHKRKEDVNECIVCSQNHRDVIFTPCNHVVTCEGCAVRIK
KCLLCRGVVESWRKIDECMVCSDKKANVLFKPCSHVVVCRDCARLMKKCV
ECRSVIESTVPLEEFYHEKKEEIATPSSPKTQDVNVLSKQLEDMKEQIVC
VVCLDRRKNMIFLCGHGACQLCGDKLVDCPICRKPIEKRILVF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011200XLOC_011200Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019953TCONS_00019953Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR001841Znf_RING
IPR020683Ankyrin_rpt-contain_dom
IPR010606Mib_Herc2
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0046872metal ion binding
GO:0004842ubiquitin-protein transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 763..777
score: 35.17
coord: 649..664
score: 41.77
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 715..776
e-value: 160.0
score: 11.0
coord: 648..678
e-value: 1.9E-6
score: 37.4
coord: 682..711
e-value: 0.004
score: 26.4
coord: 480..509
e-value: 0.016
score: 24.4
coord: 513..542
e-value: 38.0
score: 13.2
coord: 579..608
e-value: 6.7E-4
score: 29.0
coord: 546..575
e-value: 2.4
score: 17.1
coord: 612..644
e-value: 1.1
score: 18.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 579..611
score: 12.876
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 648..672
score: 12.102
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 480..512
score: 11.835
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 682..714
score: 12.342
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 546..578
score: 10.312
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 513..545
score: 9.725
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 868..902
e-value: 0.12
score: 19.2
coord: 950..982
e-value: 0.0021
score: 27.3
coord: 821..855
e-value: 0.096
score: 20.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 950..983
score: 10.586
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 821..856
score: 9.583
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 868..903
score: 9.17
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 950..986
e-value: 6.92926E-5
score: 40.5068
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 543..622
e-value: 3.5E-27
score: 94.2
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 429..542
e-value: 1.3E-24
score: 86.2
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 683..727
e-value: 2.0E-7
score: 31.4
coord: 612..677
e-value: 2.3E-10
score: 40.8
coord: 530..610
e-value: 1.4E-12
score: 47.9
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 623..789
e-value: 2.5E-41
score: 140.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 480..723
score: 70.591
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 452..793
IPR010606Mib-herc2PFAMPF06701MIB_HERC2coord: 155..219
e-value: 5.5E-24
score: 84.1
coord: 17..73
e-value: 2.2E-17
score: 63.0
IPR010606Mib-herc2PROSITEPS51416MIB_HERC2coord: 144..222
score: 32.916
IPR010606Mib-herc2PROSITEPS51416MIB_HERC2coord: 6..76
score: 28.901
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 819..861
e-value: 1.6E-11
score: 43.8
coord: 949..988
e-value: 1.1E-8
score: 34.7
coord: 866..908
e-value: 3.7E-10
score: 39.4
NoneNo IPR availableGENE3D1.10.1170.10coord: 915..993
e-value: 2.3E-13
score: 50.1
coord: 862..914
e-value: 2.0E-9
score: 37.4
coord: 790..861
e-value: 7.4E-11
score: 42.0
NoneNo IPR availableCDDcd00204ANKcoord: 481..600
e-value: 9.7239E-32
score: 120.566
NoneNo IPR availableCDDcd00204ANKcoord: 542..669
e-value: 2.02336E-32
score: 122.492
NoneNo IPR availableCDDcd00204ANKcoord: 643..798
e-value: 7.33417E-26
score: 103.617
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 65..140
NoneNo IPR availableSUPERFAMILY159034Mib/herc2 domain-likecoord: 146..221
NoneNo IPR availableSUPERFAMILY159034Mib/herc2 domain-likecoord: 14..75
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 933..991

Blast
[Close]
BLAST of TCONS_00019953-protein vs. Swiss-Prot (Human)
Match: MIB1 (E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=1 SV=1)

HSP 1 Score: 1154.43 bits (2985), Expect = 0.000e+0
Identity = 570/1023 (55.72%), Postives = 720/1023 (70.38%), Query Frame = 0 
Query:    9 NNFLAKQIGVRVIRGPDWKWGKQDGGEGHVGTVRSFESHEEVVVVWDNGTAANYRCSGAYDLRIFDSGPAGIKHDGTQCCECQSNPIYGTLWKCVECTE-EMCSTCYHNDRHNLRHRFHQLVAPGSNKVLVEPRRKSKKITARGMFPGSRVIRGVDWHWESQDGVAGRRGKITEIQDWSLLLPRSAAYVVWDTGAKNLYRLGSEGMVDLKCVSDAKGPPFYRDHLPMLGEMSVKRTYN-WQVADYVRVDLELEVVQSLQFGHGGWAYGMEEALGNSVGIISGFDDDGDVVVSYPSGNRWTFNPAVLSKVNDLPSLDSDSLVVQSLASMSLDEAEDGQRPSRGSRTGPFVEGDVVQILNNRDRVKLLQEGHGEWTDAMNETLGKIGSVTQVYQDGDLKVEVNGTSWTFNRKCVVRIGSHRQLHSDEA----KSLLKKLFEGHSSKEPSELLVKAAAEGNLKQINELFKTRAAKVDEVFAGHTALQAACQNGQVEAIKLLLEMQADTEIQDKDGDRAIHHATFCDKETPIRLLIEAGADICSRNKRRQSALHVAVNKGHLKSIETLLELNIHANLQDSEGDTALHDAITKKRDDVVAMLLEQGADISMTNYNGFNAVHHAALRGSAKAIEMLLRKNEKPWVINEQKDDGYTPLHLASLNNHLDVVQLLIKLGGANKDYQSTSLQTPLHLAIQKQHADIVRFLVLEGAKLSLQDKDGDTPLHEALQYHTLAQLKEIHDVDDV-----------QTLITNFGQPNTTKQPTNSALIACFLVAHGADLNVENAKGLKPIDLCPDSDLEKILQKCHKEYLS------TSKAAHKRKEDVNECIVCSQNHRDVIFTPCNHVVTCEGCAVRIKKCLLCRGVVESWRKIDECMVCSDKKANVLFKPCSHVVVCRDCARLMKKCVECRSVIESTVPL-----EEFYHEKKEEIATPSSPKTQ----------DVNVLSKQLEDMKEQIVCVVCLDRRKNMIFLCGHGACQLCGDKLVDCPICRKPIEKRILVF 993
            N  + + +G RV+RGPDWKWGKQDGGEGHVGTVRSFES EEVVVVWDNGTAANYRCSGAYDLRI DS P GIKHDGT C  C+  PI G  WKC ECT  ++C+ CYH D+H+LRHRF+++  PGS +VL+E RRKSKKITARG+F G+RV+RGVDW WE QDG  GRRGK+TEIQDWS   P SAAYV+WD GAKNLYR+G EGM DLKCV DAKG  FYRDH P+LGE +  R     Q+ D V +DL+LE+VQSLQ GHGGW  GM E L  + G + G D+D D+VV YPSGNRWTFNPAVL+K N + S D+               AE G        T  F  GD+VQ+  + +R+KLLQ GHGEW +AM  TLGK+G V Q+Y D DLKVEV GTSWT+N   V ++ S     S+ +      LLKKLFE   S + +E LVKAAA G++ ++ +L K     V+   AGHTA+QAA QNG V+ +KLLL+   D E +DKDGDRA+HHA F D+   I +L    AD+ +RNKRRQ+ LH+AVNKGHL+ ++TLL+   H +LQDSEGDT LHDAI+KKRDD++A+LLE GAD+++TN NGFNA+HHAALRG+  A+ +LL K  +PW+++E+KDDGYT LHLA+LNNH++V +LL+  G AN D Q+ + QT LHLA+++QH  IVR LV  GAKL +QDKDGDTPLHEAL++HTL+QL+++ D+ DV            TLI   G     K+  ++A IACFL A+GADL++ N KG  P+DLCPD +L K L KCHKE +S      +        E + EC+VCS   RD +F PC H+ TC  C+ R+KKCL+C+  V+S  KI+EC+VCSDKKA VLF+PC H+  C +CA LMKKCV+CR+V+E  VP       +   +  ++I++ + P  Q          DV  L +QL+D+KEQ +C VCLDR KNMIFLCGHG CQLCGD++ +CPICRK IE+RIL++
Sbjct:    7 NRVMVEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANYRCSGAYDLRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHLRHRFYRITTPGSERVLLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTEIQDWSASSPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGNRNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETL-TTTGTVCGIDEDHDIVVQYPSGNRWTFNPAVLTKANIVRSGDA------------AQGAEGG--------TSQFQVGDLVQVCYDLERIKLLQRGHGEWAEAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVSKVASAGSAISNASGERLSQLLKKLFETQESGDLNEELVKAAANGDVAKVEDLLKRPDVDVNGQCAGHTAMQAASQNGHVDILKLLLKQNVDVEAEDKDGDRAVHHAAFGDEGAVIEVLHRGSADLNARNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNANLDIQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDTPLHEALRHHTLSQLRQLQDMQDVGKVDAAWEPSKNTLIMGLGTQGAEKK--SAASIACFLAANGADLSIRNKKGQSPLDLCPDPNLCKALAKCHKEKVSGQVGSRSPSMISNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCCGGKSSEDATDDISSGNIPVLQKDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY 1006
The following BLAST results are available for this feature:
BLAST of TCONS_00019953-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MIB10.000e+055.72E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens G... [more]
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