TCONS_00019795-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00019795-protein
Unique Name	TCONS_00019795-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	365

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00019795-protein ID=TCONS_00019795-protein|Name=TCONS_00019795-protein|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
MINQTKFSEICPSLIQQLDSGVCASSEQTTKTPTTEHHDDEEPKWRPWIG
MIVSITIISLASLAGACTTPVTHKRWFELLLVTMIALAVAVMIGDAVLHL
FPHALNLHGHDDGHDHAHEDGNPLLKEDSYIWKSLLLLLGVYIFMQFELV
MNALGAGHSHGQVADHVISNDNANGSLPMKDEKKPTTFEYADSTPKKGLR
MKDFQTVVWMIIIGDALHNFLDGVAIGTAFTDTDKSYLGGISTSIAIFAH
ELPHELGDFAVLISSGLSIKQALMMNFLSSLTAFVGGFVGVAMGLEWKAS
PWIFAIVAGLFIYIALVNMLPEILHSNVLKTRKVLTIALVNVGLWIGFAI
MFILGVYEDDIKSSL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011131	XLOC_011131	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00019795	TCONS_00019795	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003689	ZIP

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0046873	metal ion transmembrane transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0046873	metal ion transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1070.10		coord: 241..361 e-value: 2.6E-4 score: 19.6
IPR003689	Zinc/iron permease	PFAM	PF02535	Zip	coord: 48..354 e-value: 9.7E-60 score: 202.4

Blast

[Close]

BLAST of TCONS_00019795-protein vs. Swiss-Prot (Human)
Match: S39AE (Zinc transporter ZIP14 OS=Homo sapiens GN=SLC39A14 PE=1 SV=3)

HSP 1 Score: 201.445 bits (511), Expect = 3.286e-60
Identity = 134/403 (33.25%), Postives = 198/403 (49.13%), Query Frame = 0

Query:    2 INQTKFSEICPSLIQQLDSGVCASSEQTTKTPTTEHHDDEEPKWRPWIGMIVSITIISLASLAGACTTPVTHKRWFELLLVTMIALAVAVMIGDAVLHLFPHALNLHGHDDGHDHAHEDGNPLLKEDSYIWKSLLLLLGVYIFMQFELVMNALGA-------GHSHGQVA---------------------DHVI---SNDNANGSLPMKDEK------KPTTFEYADSTPK--KGLRMKDFQTVVWMIIIGDALHNFLDGVAIGTAFTDTDKSYLGGISTSIAIFAHELPHELGDFAVLISSGLSIKQALMMNFLSSLTAFVGGFVGVAMGLEWKASPWIFAIVAGLFIYIALVNMLP---EILHSNVLKTRKVLTIALVNVGLWIGFAIMFILGVYEDDIK 362
            I  ++  E CP+++QQLDS  C +SE        +  +        W   ++ +T+ISL SL GA   P   K +++ LL+  IALA+  +  +A+  L P A                 NPL  ED Y+ KS ++  G Y+F   E ++  L         GHSH                         DH+I    +   +G  PM DEK           + + S     KG+R  D  T+ WMI + D LHNF+DG+AIG +FT    S   GISTS+AI   E PHELGDF +L+++G+SI+QAL  NFLS+   ++G   G+  G  + A+ WIFA+  G+F+YI+L +M P   E+   +  K   ++   + N+GL  GF IM +L +Y   I+
Sbjct:  109 IGSSELQEFCPTILQQLDSRAC-TSENQENEENEQTEEGRPSAVEVWGYGLLCVTVISLCSLLGASVVPFMKKTFYKRLLLYFIALAIGTLYSNALFQLIPEAFGF--------------NPL--EDYYVSKSAVVFGGFYLFFFTEKILKILLKQKNEHHHGHSHYASESLPSKKDQEEGVMEKLQNGDLDHMIPQHCSSELDGKAPMVDEKVIVGSLSVQDLQASQSACYWLKGVRYSDIGTLAWMITLSDGLHNFIDGLAIGASFT---VSVFQGISTSVAILCEEFPHELGDFVILLNAGMSIQQALFFNFLSACCCYLGLAFGILAGSHFSAN-WIFALAGGMFLYISLADMFPEMNEVCQEDERKGSILIPFIIQNLGLLTGFTIMVVLTMYSGQIQ 490

The following BLAST results are available for this feature:

BLAST of TCONS_00019795-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00019795-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S39AE	3.286e-60	33.25	Zinc transporter ZIP14 OS=Homo sapiens GN=SLC39A14...	[more]

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TCONS_00019795-protein (polypeptide) - C. hemisphaerica