TCONS_00019771-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00019771-protein
Unique Name	TCONS_00019771-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	529

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00019771-protein ID=TCONS_00019771-protein|Name=TCONS_00019771-protein|organism=Clytia hemisphaerica|type=polypeptide|length=529bp
MDRKRSHDSGQGIALQHENKKELNVDDFLHLVGDYGKFQKTLNVIFGLME
IPYIFVIYILTFTAFEPEWRCAENSTVCSLNGTFTSENNFRCHIPRSEWE
YLQPKEYSIVVEYDLSCGGEWLISLSVSIIFVGALFGAVILTWVSDNFGR
KKLMFISYTAGTIANFASCLMPNMSLFIMFRFFSGFFMPGANVFVMIIET
VGEKHRAFAGNLIWLFYAVALCLLPLKAYFISSWKLLFVAGSLPYLVFVA
TYQFVPESVRWLRLKSRTKDALAIFQRMAKWNGRVLDPTVTLSPVSKEKE
ITNPLDVFRPKQMAMTSIVFIFCFYTNSLVYFGLTMTAGDLGSGSLHLNF
VLMSLVEFPAALLATYCCDKFGRKKSSTFPLALSGLLVVTVSLLPITTQA
FRMVRTITGIFAKLFITMSYDCIATLVVEAYPTNIRSEALGIMGVAATIG
GASAPWVAKGLSTLVAELPFYVMGTLGVVAGVSCYLLPETKGTLLRESKI
DFQLVPTHPPDNDDKEARQREKSHFESTA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011118	XLOC_011118	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00019771	TCONS_00019771	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005828	MFS_sugar_transport-like
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 37..272 e-value: 3.9E-23 score: 81.3
None	No IPR available	GENE3D	1.20.1250.20		coord: 293..505 e-value: 4.8E-21 score: 74.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 505..529
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 103..499 e-value: 3.6E-26 score: 91.9
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 75..492 score: 16.248
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 121..488 e-value: 9.22291E-26 score: 106.244
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 120..493

Blast

[Close]

BLAST of TCONS_00019771-protein vs. Swiss-Prot (Human)
Match: S22A3 (Solute carrier family 22 member 3 OS=Homo sapiens GN=SLC22A3 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 2.336e-67
Identity = 158/558 (28.32%), Postives = 263/558 (47.13%), Query Frame = 0

Query:   26 DDFLHLVGDYGKFQKTLNVIFGLMEIPYIFVIYILTFTAFEPE--W-----------RCAE------NSTVCSLNGTFTSENNFRCH---------------------------------IP-RSEWEYLQPKEYSIVVEYDLSCGGEWLISLSVSIIFVGALFGAVILTWVSDNFGRKKLMFISYTAGTIANFASCLMPNMSLFIMFRFFSGFFMPGA--NVFVMIIETVGEKHRAFAGNLIWLFYAVALCLLPLKAYFISSWKLLFVAGSLPYLVFVATYQFVPESVRWLRLKSRTKDALAIFQRMAKWNGRVLDPTVTLSPVSKEKEITNP--LDVFRPKQMAMTSIVFIFCFYTNSLVYFGLTMTAGDLGSGSLHLNFVLMSLVEFPAALLATYCCDKFGRKKSSTFPLALSGLLVVTVSLLPITTQAFRMVRTITGIFAKLFITMSYDCIATLVVEAYPTNIRSEALGIMGVAATIGGASAPWVAKGLSTLVAELPFYVMGTLGVVAGVSCYLLPETKGTLLRESKIDFQ-LVPTHPPDNDDKEARQREKSHF 525
            D+ L  VG++G+FQ+ + ++  L  + + F+   + F   +P+  W           RC        N T  +  G    E   RC                                  +P R  W Y Q    +IV E+DL C   W++ L+ +I+ +G L GA  L + +D +GR  +  +S     +        PN  +F++FRF  G F  G     +V++ E VG K R   G +I +F+ + + +LP  AYFI +W+ + +A +LP  +F+  Y  VPES RWL  + +   AL I +R+AK NG+ L    +   V+ E E++NP  LD+ R  QM   +++ +F ++T+++VY GL M  G +G G+L+++F +  +VE P ALL     ++ GR+        ++G+  +  + LP   +    +RT      +L ITM+++ +  +  E YPT +R+  + +       GG  AP++   L+ +  ELP  + G L  + G    LLPETKG  L E+  D + L   H       +     +SH 
Sbjct:    5 DEALQRVGEFGRFQRRVFLLLCLTGVTFAFLFVGVVFLGTQPDHYWCRGPSAAALAERCGWSPEEEWNRTAPASRGPEPPERRGRCQRYLLEAANDSASATSALSCADPLAAFPNRSAPLVPCRGGWRYAQAHS-TIVSEFDLVCVNAWMLDLTQAILNLGFLTGAFTLGYAADRYGRIVIYLLSCLGVGVTGVVVAFAPNFPVFVIFRFLQGVFGKGTWMTCYVIVTEIVGSKQRRIVGIVIQMFFTLGIIILPGIAYFIPNWQGIQLAITLPSFLFLLYYWVVPESPRWLITRKKGDKALQILRRIAKCNGKYLSSNYSEITVTDE-EVSNPSFLDLVRTPQMRKCTLILMFAWFTSAVVYQGLVMRLGIIG-GNLYIDFFISGVVELPGALLILLTIERLGRRLPFAASNIVAGVACLVTAFLP---EGIAWLRTTVATLGRLGITMAFEIVYLVNSELYPTTLRNFGVSLCSGLCDFGGIIAPFLLFRLAAVWLELPLIIFGILASICGGLVMLLPETKGIALPETVDDVEKLGSPHSCKCGRNKKTPVSRSHL 556

The following BLAST results are available for this feature:

BLAST of TCONS_00019771-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00019771-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S22A3	2.336e-67	28.32	Solute carrier family 22 member 3 OS=Homo sapiens ...	[more]

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TCONS_00019771-protein (polypeptide) - C. hemisphaerica