TCONS_00019705-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019705-protein
Unique NameTCONS_00019705-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length253

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019705-protein ID=TCONS_00019705-protein|Name=TCONS_00019705-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MVMGDKWKATDHGYKYGVALCNFTPSESLQHGLKLNVGETVQIQEEYQGW
FKGKLMQDRSITGIFPKNHVKVKEANLVNFGKFEEVIPTLEPVIEESTSV
LREWGSLSKDLFLERSLSIFQVLKATMNTLMENRREIIFGKLTQDQQKEL
KEKITDKIDSVNKKLNLDLVPRIDGEIIEGDSASVVELYQVHLESSKRIS
RSKAKSKRNSSASGQHNQEKRMSIYGTLSKRPPPLKTPTSHHFFIAFKSF
ICX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011094XLOC_011094Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019705TCONS_00019705Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR032376DOCK_N
IPR011511SH3_2
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainSMARTSM00326SH3_2coord: 15..74
e-value: 3.3E-7
score: 40.0
IPR001452SH3 domainPROSITEPS50002SH3coord: 12..75
score: 8.979
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 12..72
IPR032376Dedicator of cytokinesis, N-terminal domainPFAMPF16172DOCK_Ncoord: 81..252
e-value: 9.3E-39
score: 133.3
NoneNo IPR availableGENE3D2.30.30.40coord: 44..229
e-value: 2.4E-6
score: 26.5
NoneNo IPR availableGENE3D2.30.30.40coord: 6..43
e-value: 0.015
score: 14.6
IPR011511Variant SH3 domainPFAMPF07653SH3_2coord: 16..72
e-value: 3.7E-5
score: 23.2

Blast
[Close]
BLAST of TCONS_00019705-protein vs. Swiss-Prot (Human)
Match: DOCK3 (Dedicator of cytokinesis protein 3 OS=Homo sapiens GN=DOCK3 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 3.688e-50
Identity = 91/244 (37.30%), Postives = 148/244 (60.66%), Query Frame = 0 
Query:    7 WKATDHGYKYGVALCNFTPSESLQHGLKLNVGETVQIQEEYQGWFKGKLMQDRSITGIFPKNHVKVKEANLVNFGKFEEVIPTLEPVIEESTSVLREWGSLSKDLFLERSLSIFQVLKATMNTLMENRREIIFGKLTQDQQKELKEKITDKIDSVNKKLNLDLVPRIDGEIIEGDSASVVELYQVHLESSKRISRSKAKSKRNSSASGQHNQEKRMSIYGTLSKRPPPLKTPTSHHFFIAFKSF 250
            W  T+   KYGV +C+F    S+  GL L +GETVQI E+ +GW++G   +  ++ GIFP N++ +K+A + N G++E V+P  + ++ E T+ L+EW SL K L+++  + +F  L+  MN L++ RR+++ G LTQDQ +E+K  IT ++D  N+ L LDLVPR D E+++ D  SV +LY++HL S + + +S ++     +   +H +  RM               P  HHFF++ KSF
Sbjct:    2 WTPTEEE-KYGVVICSF--RGSVPQGLVLEIGETVQILEKCEGWYRGVSTKKPNVKGIFPANYIHLKKAIVSNRGQYETVVPLEDSIVTEVTATLQEWASLWKQLYVKHKVDLFYKLRHVMNELIDLRRQLLSGHLTQDQVREVKRHITVRLDWGNEHLGLDLVPRKDFEVVDSDQISVSDLYKMHLSSRQSVQQSTSQV---DTMRPRHGETCRM---------------PVPHHFFLSLKSF 224
The following BLAST results are available for this feature:
BLAST of TCONS_00019705-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DOCK33.688e-5037.30Dedicator of cytokinesis protein 3 OS=Homo sapiens... [more]
back to top