TCONS_00019650-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019650-protein
Unique NameTCONS_00019650-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length850

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019650-protein ID=TCONS_00019650-protein|Name=TCONS_00019650-protein|organism=Clytia hemisphaerica|type=polypeptide|length=850bp
MSEKKSKRVPKRKVLYDDEITEVEIPTIKTTKKKKKEPKQTTPPIKIKIK
TPTTKKETVSKKEKTKSPPSKANTPKTSPSKKTAGDKKGKLKAPKISTKA
SSASSKAGKSSNLKCPKMSCTSGHMVCFRCSNEGHSARWYHMSDAEHFCN
NCFDFFYRSHKKGHLEEFEPWKTLWSASCRREGPLKLFMQEETVPFWAQC
NECEKWRQLGYGEEINKEFNENFVCSMIDEMECSDEENIYVKDYKQYEWL
KTLVHPPFLKNSPASPFLKDFYYDGIGLSPPKEQEEPEEKFMENLIPFYS
PEDSEKARCICADVMTGEEREEFKHHIKDASIFLGLRNLIIAMWNINPKQ
YLTYHVCRNRLICRGIGRLTLAEELKKVLDFLTINGYVNFGILNRVPTHF
NLNYWTGSVIVVGAGIAGIGAARQLTNAGCKVTVLEASDRCGGRLKDDHS
LGNCIGLGAQILTGCINNPLYVMCEQVSLPLRYLGMRCDLIDDKGALIDT
PIDQEIEFRFNLMLDSLEDWKQTISNRERDSYSLSEALAEQLKELQKSLC
KDMTQMEKNLLEFHLGNLEYGCGSSLQNVSALHWNQNENYPQYSGAHAWA
IDGFERIVTSLADGLDVRLNSPVASITYTNKNTCEVKTKSGKTLKADKIV
CALPLSTYQSKFVEFDPELPKDKLKAIGRLGAGLIEKIALKFPTAFWRNK
IGDADYFGHVPGTSEDRGMFSVFYDVSREDDFILMTVLAGEAVKRRNEMT
DQELVDKCMSTLRKIFTGETVPDPTAQIISHWGDDTYTRMAYSYVKVGSS
GQDLDILANTVNEKLYFAGEATNRQFPQTVTGAYLSGLREAKKILRSNSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011061XLOC_011061Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019650TCONS_00019650Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007526SWIRM
IPR011124Znf_CW
IPR002937Amino_oxidase
IPR011991WHTH_DNA-bd_dom
IPR023753FAD/NAD-binding_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003677 DNA binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 539..559
NoneNo IPR availableGENE3D3.40.50.20coord: 407..453
e-value: 2.0E-5
score: 24.6
NoneNo IPR availableGENE3D3.90.660.20coord: 454..772
e-value: 2.9E-49
score: 167.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..111
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 681..794
IPR007526SWIRM domainPFAMPF04433SWIRMcoord: 313..390
e-value: 1.3E-8
score: 35.0
IPR007526SWIRM domainPROSITEPS50934SWIRMcoord: 301..399
score: 12.754
IPR011124Zinc finger, CW-typePFAMPF07496zf-CWcoord: 196..238
e-value: 2.3E-9
score: 37.0
IPR011124Zinc finger, CW-typePROSITEPS51050ZF_CWcoord: 191..241
score: 11.102
IPR002937Amine oxidasePFAMPF01593Amino_oxidasecoord: 416..845
e-value: 2.1E-83
score: 281.0
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 303..399
e-value: 1.0E-14
score: 53.4
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 773..849
e-value: 1.0E-5
score: 24.8
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 805..846
coord: 408..700
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 306..398

Blast
[Close]
BLAST of TCONS_00019650-protein vs. Swiss-Prot (Human)
Match: KDM1B (Lysine-specific histone demethylase 1B OS=Homo sapiens GN=KDM1B PE=1 SV=3)

HSP 1 Score: 617.461 bits (1591), Expect = 0.000e+0
Identity = 328/833 (39.38%), Postives = 494/833 (59.30%), Query Frame = 0 
Query:   59 VSKKEKTKSPPSKANTPKTSPSKKTAGDKKGKLKAPKISTKASSASSKAGKSSNL-KCPKMSCTSGHMVCF-----RCSNEGHSARWYHMSDAEHFCNNCFDFFYRSHKKGHLEEFEPWKTLWSASCRREGPLKLFMQEETVPFWAQCN--ECEKWRQLGYGEEINKEFNENFVCSMIDEM--------ECSDEENIYVKDYKQYEWLKTLVHPPFLKNSPASPFLKDFYYDGIGLSP---------------PKEQEEPEEKFMENLI-------PFYSPEDSEKARCICADVMTGEEREEFKHHIKDASIFLGLRNLIIAMWNINPKQYLTYHVCRNRLICRGIGRLTLAEELKKVLDFLTINGYVNFGILNRVPTHFNL--NYWTGSVIVVGAGIAGIGAARQLTNAGCKVTVLEASDRCGGRLKDDHSL-GNCIGLGAQILTGCINNPLYVMCEQVSLPLRYLGMRCDLIDDKGALIDTPIDQEIEFRFNLMLDSLEDWKQTISNRERDSYSLSEA-LAEQLKELQKSLCKD----MTQMEKNLLEFHLGNLEYGCGSSLQNVSALHWNQNENYPQYSGAHAWAIDGFERIVTSLADGLDVRLNSPVASITYTNKNTCEVKTKSGKTLKADKIVCALPLSTYQSKFVEFDPELPKDKLKAIGRLGAGLIEKIALKFPTAFWRNKIGDADYFGHVPGTSEDRGMFSVFYDVS-REDDFILMTVLAGEAVKRRNEMTDQELVDKCMSTLRKIFTGETVPDPTAQIISHWGDDTYTRMAYSYVKVGSSGQDLDILANTVNEKLYFAGEATNRQFPQTVTGAYLSGLREAKKI 844
             + + +TK   S  ++P + P + +    K K      +T+ +      G      KC K  CT+   VCF     RC+  G+++RWYH+S  EHFCN CFD +YRSHK G+ +++  WK +W+++ + E   K FM ++ +P+W QC   EC KWRQL    ++  +  + + C M             CS  E++ V +   + W   L+ PP LK+S A+P L  +Y D +G+SP               P + E  +     ++        PFY P +  KA C+  DVM  +E  EF  + +D +++L LRNLI+A+W  N K+ LT   C   +I RG+ R+   +E++++L F+T  G +N G+L+     + L  +Y   SVI++GAG AG+ AARQL N G KVTVLEA DR GGR+ DD S  G  +G GAQI+ GCINNP+ +MCEQ+ + +   G RCDLI + G + D  ID+ ++F FN +LD + +W+       +D   L +  L E+++E+ K+  K+     +++E  +L+FHL NLEY CGS+L  VSA  W+ NE + Q++G H     G+  I+  LA+GLD++L SPV  I Y+  +  +V T  G    A K++  +PL+  Q   ++F+P L + K+KAI  LGAG+IEKIAL+FP  FW +K+  AD+FGHVP ++  RG+F+VFYD+  ++   +LM+V+AGEAV     + D++++ +CM+TLR++F  + VPDPT   ++ W  D + +MAYS+VK G SG+  DI+A  +   ++FAGEATNR FPQTVTGAYLSG+REA KI
Sbjct:    2 ATPRGRTKKKASFDHSPDSLPLRSSGRQAKKK------ATETTDEDEDGGSEKKYRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGY-DKYTTWKKIWTSNGKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKPETSDHCSLPEDLRVLEVSNHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTNRAAATGNASPGKLEHSKAALSVHVPGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSRDPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWR-------KDKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIQLKSPVQCIDYSG-DEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKI 819
The following BLAST results are available for this feature:
BLAST of TCONS_00019650-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KDM1B0.000e+039.38Lysine-specific histone demethylase 1B OS=Homo sap... [more]
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