TCONS_00019589-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019589-protein
Unique NameTCONS_00019589-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length276

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019589-protein ID=TCONS_00019589-protein|Name=TCONS_00019589-protein|organism=Clytia hemisphaerica|type=polypeptide|length=276bp
MAEPEKVPPVSYQQPGAQPHYQPTAQYQQPVAGGPPGQPQFGAAAGMQWM
PPVQQAPVGCPRGLEYLTQLDQLIVKQQIELLEVFTGWETNNKYRILNSV
GQDVYFAVEDNDCCNRQCCGPARSFNMKVLDNYQQEIISLWRPLKCQACC
CWCCLQEMEIRSGGEICGYVEQKWSLWDYKFDLMDAQRNTVLKIRGPCCV
IPCCVDVNFQLLALDETTQVGEIIRQFTGCGQECWTDASNFSITFPMDLD
VKMKAVVFGATMLLDFMFFEHQNNNN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011013XLOC_011013Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019589TCONS_00019589Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005552Scramblase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005552ScramblasePFAMPF03803Scramblasecoord: 51..270
e-value: 8.9E-83
score: 276.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39

Blast
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BLAST of TCONS_00019589-protein vs. Swiss-Prot (Human)
Match: PLS1 (Phospholipid scramblase 1 OS=Homo sapiens GN=PLSCR1 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 1.099e-86
Identity = 148/286 (51.75%), Postives = 187/286 (65.38%), Query Frame = 0 
Query:    4 PEKVPPVSYQQPGAQPHYQ-PTAQYQQPVAG----GP-----PGQPQFG--------AAAGMQWMPPVQQAPVGCPRGLEYLTQLDQLIVKQQIELLEVFTGWETNNKYRILNSVGQDVYFAVEDNDCCNRQCCGPARSFNMKVLDNYQQEIISLWRPLKCQACCCWCCLQEMEIRS-GGEICGYVEQKWSLWDYKFDLMDAQRNTVLKIRGPCCVIPCCVDVNFQLLALDETTQVGEIIRQFTGCGQECWTDASNFSITFPMDLDVKMKAVVFGATMLLDFMFFE 270
            P + PP ++Q P     Y  P   Y  P AG    GP     P QP +          AAG+ WMP   Q P+ CP GLEYL+Q+DQ+++ QQIELLEV TG+ETNNKY I NS GQ VYFA ED DCC R CCGP+R F ++++DN  QE+I+L RPL+C +CCC CCLQE+EI++  G   GYV Q W     KF + + +R  VLKI GPC V  CC DV+F++ +LDE   VG+I + +TG  +E +TDA NF I FP+DLDVKMKAV+ GA  L+DFMFFE
Sbjct:   22 PPQYPPTAFQGPPGYSGYPGPQVSYPPPPAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMP-APQPPLNCPPGLEYLSQIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLERPLRCSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKISGPCVVCSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKAVMIGACFLIDFMFFE 306
The following BLAST results are available for this feature:
BLAST of TCONS_00019589-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLS11.099e-8651.75Phospholipid scramblase 1 OS=Homo sapiens GN=PLSCR... [more]
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