TCONS_00019554-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019554-protein
Unique NameTCONS_00019554-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019554-protein ID=TCONS_00019554-protein|Name=TCONS_00019554-protein|organism=Clytia hemisphaerica|type=polypeptide|length=186bp
MGGSQSAFTVEELKEYQELTYFTQKEILHCFKRFQQLDPTLVTYNNKNPQ
LPQKTILKLPELEVNPFRDRICKVFSSSHDGNMTFEDFLDMMSVFSENAP
KTVKVEYAFRIYDFNEDDYICESDLKRVIDRLCGEDDKLSSEDTNSIVKK
ILLEADLDDDNQLSFAEFEHVISKAPDFLNAFRIRV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010995XLOC_010995Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019554TCONS_00019554Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 67..95
e-value: 45.0
score: 4.5
coord: 147..175
e-value: 1.1
score: 17.4
coord: 104..132
e-value: 4.8
score: 12.3
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 105..171
e-value: 1.0E-10
score: 41.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 143..178
score: 9.436
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 69..98
score: 7.846
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 100..135
score: 9.074
IPR002048EF-hand domainCDDcd00051EFhcoord: 104..173
e-value: 2.67578E-7
score: 44.0757
NoneNo IPR availableGENE3D1.10.238.10coord: 9..186
e-value: 2.9E-34
score: 117.8
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 156..168
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 113..125
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 1..184

Blast
[Close]
BLAST of TCONS_00019554-protein vs. Swiss-Prot (Human)
Match: CIB3 (Calcium and integrin-binding family member 3 OS=Homo sapiens GN=CIB3 PE=1 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 2.119e-56
Identity = 89/189 (47.09%), Postives = 129/189 (68.25%), Query Frame = 0 
Query:    1 MGGSQSAFTVEELKEYQELTYFTQKEILHCFKRFQQLDPTLVTYNNK---NPQLPQKTILKLPELEVNPFRDRICKVFSSSHDGNMTFEDFLDMMSVFSENAPKTVKVEYAFRIYDFNEDDYICESDLKRVIDRLCGEDDKLSSEDTNSIVKKILLEADLDDDNQLSFAEFEHVISKAPDFLNAFRIRV 186
            MG  Q+ FT E+L+ YQ+ T+FT+KEI+  F R+Q L P LV  +     + ++P + I  +PEL+ NPFR RI +VFS   DG+MT ++FLDM SV SE AP+ +K  YAF+IYDFN DDYIC  DL++ + +L      LS+E+ + + +K+L EAD D D +LS  +F+++I +APDFL+ F IR+
Sbjct:    1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIGSMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNNDDYICAWDLEQTVTKLTR--GGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILRAPDFLSTFHIRI 187
The following BLAST results are available for this feature:
BLAST of TCONS_00019554-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CIB32.119e-5647.09Calcium and integrin-binding family member 3 OS=Ho... [more]
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