TCONS_00019420-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019420-protein
Unique NameTCONS_00019420-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length217

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019420-protein ID=TCONS_00019420-protein|Name=TCONS_00019420-protein|organism=Clytia hemisphaerica|type=polypeptide|length=217bp
MKLYVVKISPCCRVVWLYCLQNDIKVEIEDVDVFSGEHKTENFKKMSPFS
EFPVLSDGENSIYGACPILLYLGEKYSNFKCFGEDGKQNMMVKSMLSWAS
SELHQVLGYRVVYPNFMESYQLTGDSTEGLIEKGTKELTKMLEMMENVFL
RRNKFLTGSSITVADYYVATLILQLEWLEFDFSLWPKLTNWLNTFKDLEL
WKKVHEKHNGFVAELKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010907XLOC_010907Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019420TCONS_00019420Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004045Glutathione_S-Trfase_N
IPR004046GST_C
IPR010987Glutathione-S-Trfase_C-like
IPR012336Thioredoxin-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004045Glutathione S-transferase, N-terminalPFAMPF13417GST_N_3coord: 3..78
e-value: 2.5E-11
score: 43.7
IPR004045Glutathione S-transferase, N-terminalPROSITEPS50404GST_NTERcoord: 1..80
score: 13.236
NoneNo IPR availableGENE3D1.20.1050.10coord: 98..214
e-value: 1.4E-18
score: 66.7
NoneNo IPR availableGENE3D3.40.30.10coord: 1..97
e-value: 1.5E-22
score: 79.4
NoneNo IPR availableSFLDSFLDS00019Glutathione_Transferase_(cytocoord: 1..206
e-value: 2.6E-22
score: 74.5
IPR004046Glutathione S-transferase, C-terminalPFAMPF00043GST_Ccoord: 127..195
e-value: 1.4E-8
score: 34.7
IPR010987Glutathione S-transferase, C-terminal-likePROSITEPS50405GST_CTERcoord: 85..217
score: 16.359
IPR010987Glutathione S-transferase, C-terminal-likeSUPERFAMILY47616GST C-terminal domain-likecoord: 86..208
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 1..79

Blast
[Close]
BLAST of TCONS_00019420-protein vs. Swiss-Prot (Human)
Match: GSTT1 (Glutathione S-transferase theta-1 OS=Homo sapiens GN=GSTT1 PE=1 SV=4)

HSP 1 Score: 88.5817 bits (218), Expect = 1.806e-21
Identity = 60/216 (27.78%), Postives = 107/216 (49.54%), Query Frame = 0 
Query:    1 MKLYVVKISPCCRVVWLYCLQNDIKVEIEDVDVFSGEHKTENFKKMSPFSEFPVLSDGENSIYGACPILLYLGEKYSNFKC-FGEDGKQNMMVKSMLSWASSELH----QVLGYRVVYPNFMESYQLTGDSTEGLIEKGT-KELTKMLEMMENVFLRRNKFLTGSSITVADYYVATLILQLEWLEFD-FSLWPKLTNWLNTFKDL---ELWKKVHE 206
            ++LY+  +S  CR V+++  +NDI  E+  VD+  G+H ++ F +++P  + P L DG+ ++  +  ILLYL  KY      + +D +    V   L+W  + L     + L ++V++P F+      G+         T  EL   L+++E+ FL+   FLTG  I++AD    T ++         F   PKL  W    +     +L+++ HE
Sbjct:    3 LELYLDLLSQPCRAVYIFAKKNDIPFELRIVDLIKGQHLSDAFAQVNPLKKVPALKDGDFTLTESVAILLYLTRKYKVPDYWYPQDLQARARVDEYLAWQHTTLRRSCLRALWHKVMFPVFL------GEPVSPQTLAATLAELDVTLQLLEDKFLQNKAFLTGPHISLADLVAITELMHPVGAGCQVFEGRPKLATWRQRVEAAVGEDLFQEAHE 212
The following BLAST results are available for this feature:
BLAST of TCONS_00019420-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GSTT11.806e-2127.78Glutathione S-transferase theta-1 OS=Homo sapiens ... [more]
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