TCONS_00019271-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019271-protein
Unique NameTCONS_00019271-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length416

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019271-protein ID=TCONS_00019271-protein|Name=TCONS_00019271-protein|organism=Clytia hemisphaerica|type=polypeptide|length=416bp
MQFHIFGLLLFQAVCFGCSEAGKTSKKDTQHTHMSGRHVCSRTKESFKYY
PVERTLCIPKFITFLRPCTDRWGKKTKGMCTAYRQKYTKVIKTFYQKHKE
SKVEFSCCAGWKKVPGKKGCTQPTCKGNCNGNGLCTGPNKCACTPGWQGP
SCQTDINECLKNNGKCQQKCINYRGTFKCQCDPGYILQKDGRSCKFCIKC
SEEYQQLEKRMTNVEKETSTLKTENKKLKSEINHIDTTLQKQQDEIMVNA
LEHQNQLKSISKIQEKMKEDHEQQQSEQKPTQPAPYSPEPIKGQQETVPD
KSSNEASLKVFDQGNVQEGLSAEDNEETKEEDEEEKKKDEKKEMGDKEMM
EEAKKFMAQSPATYLIFNKLVEKLDMLEKRINKCSCATIAAQTNDIYSND
TSDLESYYTYDDSQKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010821XLOC_010821Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019271TCONS_00019271Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001881EGF-like_Ca-bd_dom
IPR000742EGF-like_dom
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR013032EGF-like_CS
IPR018097EGF_Ca-bd_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 322..343
NoneNo IPR availableCOILSCoilCoilcoord: 197..245
NoneNo IPR availablePFAMPF14670FXa_inhibitioncoord: 159..194
e-value: 3.2E-10
score: 40.0
NoneNo IPR availableGENE3D2.40.155.10coord: 182..283
e-value: 3.3E-7
score: 29.5
coord: 140..159
e-value: 0.0038
score: 16.2
NoneNo IPR availableGENE3D2.10.25.10coord: 160..181
e-value: 1.5E-14
score: 53.4
NoneNo IPR availableGENE3D2.60.40.1510coord: 19..139
e-value: 1.6E-4
score: 21.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..347
NoneNo IPR availableCDDcd00054EGF_CAcoord: 155..195
e-value: 1.26833E-5
score: 41.083
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 154..200
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 155..195
e-value: 5.0E-10
score: 49.3
IPR000742EGF-like domainSMARTSM00181egf_5coord: 124..153
e-value: 4.3
score: 16.3
coord: 158..195
e-value: 2.7E-4
score: 30.3
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 155..195
score: 7.881
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 121..153
score: 10.776
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 170..181
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 179..194
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 141..152
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 141..152
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 155..179

Blast
[Close]
BLAST of TCONS_00019271-protein vs. Swiss-Prot (Human)
Match: EGFL7 (Epidermal growth factor-like protein 7 OS=Homo sapiens GN=EGFL7 PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 2.740e-25
Identity = 75/267 (28.09%), Postives = 118/267 (44.19%), Query Frame = 0 
Query:   29 TQHTHMSGRHVCSRTKESFKYYPVERTLCIPKFITFLRPCTDRWGKKTKGMCTAYRQKYTKVIKTFYQKH---KESKVEFSCCAGWKKVPGKKG-CTQPTCKGNCNGNGLCTGPNKCACTPGWQGPSCQTDINECLKNNGKCQQKCINYRGTFKCQCDPGYILQKDGRSCKFCIKCSEEYQQLEKRMTNVEKETSTLKTENKKLKSEINHIDTTLQ---KQQDEIMVNALEHQ------------NQLKSISKIQEKMKEDHEQQQS 276
            T+H +  GR VC+         PV  +     +  FL  C    G +    C+ YR  Y    +T Y++      ++  ++CC GWK+  G  G C    C+  C   G C  P +C C  GW+G +CQ+D++EC    G C Q+C+N  G++ CQC  G+ L  DG     C+       ++    T V+   S +K E ++L+S ++ ++  LQ        +   ALEH              QL  I  + E++    EQ  S
Sbjct:   20 TEHAYRPGRRVCAVRAHGD---PVSESFVQRVYQPFLTTCD---GHRA---CSTYRTIY----RTAYRRSPGLAPARPRYACCPGWKRTSGLPGACGAAICQPPCRNGGSCVQPGRCRCPAGWRGDTCQSDVDECSARRGGCPQRCVNTAGSYWCQCWEGHSLSADG---TLCVP-KGGPPRVAPNPTGVD---SAMKEEVQRLQSRVDLLEEKLQLVLAPLHSLASQALEHGLPDPGSLLVHSFQQLGRIDSLSEQISFLEEQLGS 266
The following BLAST results are available for this feature:
BLAST of TCONS_00019271-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EGFL72.740e-2528.09Epidermal growth factor-like protein 7 OS=Homo sap... [more]
back to top