TCONS_00019089-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019089-protein
Unique NameTCONS_00019089-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length356

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019089-protein ID=TCONS_00019089-protein|Name=TCONS_00019089-protein|organism=Clytia hemisphaerica|type=polypeptide|length=356bp
MQKAKEYDWKESNMALFGSDTEKKVKKESAESEPAWQGAGEEVGLKIWRI
VKFEVTGWEDDQYGEFYNGDSYIILNTYKEPEGDELKHDVHFWIGKYSTQ
DEYGTAAYKTVELDTFLDDKPVQHREVQGHESSLFKSYFDSMSLLEGGAD
TGFKRVLPEAYEPRLFVVQKGANKKITCSQIELKRGNLSSDNVYIIDNGL
NVYQWNGSDCSPDEKFKAATEVDKIEGKRSGCKTHTLEERSCGDNHPAIQ
ILGPGKSEDAGEMPEGEKKVLKIKDGEDVEEVASGDDISKDQLQSDDVYI
INTGDHVYCWVGKGASVDERKNGIPYACNYLSKTETPWLPVSVVAEGSEP
NVAFFA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010704XLOC_010704Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019089TCONS_00019089Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007122Villin/Gelsolin
IPR029006ADF-H/Gelsolin-like_dom
IPR007123Gelsolin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0051015actin filament binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0051015 actin filament binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007122Villin/GelsolinPRINTSPR00597GELSOLINcoord: 62..78
score: 52.41
coord: 176..196
score: 17.75
coord: 290..312
score: 37.15
coord: 122..142
score: 35.71
IPR007122Villin/GelsolinSMARTSM00262VILL_6coord: 43..142
e-value: 1.1E-22
score: 91.3
coord: 163..255
e-value: 1.9E-9
score: 47.4
coord: 266..356
e-value: 1.1E-4
score: 31.6
IPR029006ADF-H/Gelsolin-like domainGENE3D3.40.20.10coord: 27..153
e-value: 1.9E-30
score: 104.7
IPR029006ADF-H/Gelsolin-like domainGENE3D3.40.20.10coord: 260..355
e-value: 1.5E-14
score: 53.3
IPR029006ADF-H/Gelsolin-like domainGENE3D3.40.20.10coord: 160..259
e-value: 2.3E-13
score: 49.6
IPR007123Gelsolin-like domainPFAMPF00626Gelsolincoord: 63..135
e-value: 2.7E-14
score: 52.7
coord: 181..229
e-value: 4.7E-9
score: 35.9
coord: 286..351
e-value: 8.6E-9
score: 35.1
NoneNo IPR availableCDDcd11290gelsolin_S1_likecoord: 36..148
e-value: 6.20488E-54
score: 174.334
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 268..351
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 146..231
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 33..171

Blast
[Close]
BLAST of TCONS_00019089-protein vs. Swiss-Prot (Human)
Match: GELS (Gelsolin OS=Homo sapiens GN=GSN PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.036e-51
Identity = 116/335 (34.63%), Postives = 195/335 (58.21%), Query Frame = 0 
Query:   34 PAWQGAGEEVGLKIWRIVKFEVTGWEDDQYGEFYNGDSYIILNTYKEPEGDELKHDVHFWIGKYSTQDEYGTAAYKTVELDTFLDDKPVQHREVQGHESSLFKSYFDS-MSLLEGGADTGFKRVLP-EAYEPRLFVVQKGANKKITCSQIELKRGNLSSDNVYIIDNGLNVYQWNGSDCSPDEKFKAATEVDK--IEGKRSG-CKTHTLEERSCGDNHPAIQILGPGKSEDAGEMPEGEK--------KVLKIKDGE---DVEEVASGDDISKDQLQSDDVYIINTGD--HVYCWVGKGASVDERKNGIPYACNYLSKTETP-WLPVSVVAEGSE 349
            P +  AG+E GL+IWR+ KF++     + YG+F+ GD+Y+IL T +   G+ L++D+H+W+G   +QDE G AA  TV+LD +L+ + VQHREVQG ES+ F  YF S +   +GG  +GFK V+P E    RLF V+    + +  +++ +   + ++ + +I+D G N++QW GS+ +  E+ K AT+V K   + +RSG  + H  EE +  +    +Q+LGP  +  AG     ++        K+ K+ +G     V  VA  +  ++  L+S+D +I++ G    ++ W GK A+ +ERK  +  A ++++K + P    VSV+ EG E
Sbjct:   57 PEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGN-LQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVVPNEVVVQRLFQVK--GRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLK-ATQVSKGIRDNERSGRARVHVSEEGT--EPEAMLQVLGPKPALPAGTEDTAKEDAANRKLAKLYKVSNGAGTMSVSLVADENPFAQGALKSEDCFILDHGKDGKIFVWKGKQANTEERKAALKTASDFITKMDYPKQTQVSVLPEGGE 385

HSP 2 Score: 107.457 bits (267), Expect = 1.844e-25
Identity = 95/318 (29.87%), Postives = 139/318 (43.71%), Query Frame = 0 
Query:   46 KIWRIVKFEVTGWEDDQYGEFYNGDSYIILNTYKEPEGDELKHDVHFWIGKYSTQDEYGTAAYKTVELDTFLDDKPVQHREVQGHESSLFKSYF--DSMSLLEGGADTGFKRVLPEAYEPRLFVVQKGANKKITCSQIELKRGNLSSDNVYIIDNGLNVYQWNGSDCSPDEKFKA--------ATEVDKIEGKRSGCKTHTLEERSCGDNHPAIQILGPGKSEDAGEMPEGEKKVLKIKDGEDVEEVASGDDISKDQLQSDDVYIINTGDHVYCWVGKGASVDERKNGIPYACNYL---SKTETPWLPVSVVAEGSEP 350
            +IWRI        +   YG+FY GDSYIIL  Y+   G      ++ W G  STQDE   +A  T +LD  L   PVQ R VQG E +   S F    M + +GG      +  P +   RLF V+  +       ++  K G L+S++ +++      Y W G+  S  EK  A        A  V   EG         L  ++     P ++     K  DA   P       KI  G  V E   G+ + +D L +DDV +++T D V+ WVGK +  +E+   +  A  Y+           P++VV +G EP
Sbjct:  448 QIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRH--GGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQTAPAST--RLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQELLRVLRAQPVQVAEGSEPDGFWEALGGKAAYRTSPRLK----DKKMDA-HPPRLFACSNKI--GRFVIEEVPGELMQED-LATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRRTPITVVKQGFEP 753
The following BLAST results are available for this feature:
BLAST of TCONS_00019089-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GELS2.036e-5134.63Gelsolin OS=Homo sapiens GN=GSN PE=1 SV=1[more]
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