TCONS_00018908-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018908-protein
Unique NameTCONS_00018908-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length104

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018908-protein ID=TCONS_00018908-protein|Name=TCONS_00018908-protein|organism=Clytia hemisphaerica|type=polypeptide|length=104bp
RMKEFLESTKEKSDLITAFKNREVKEKLDFRKSAKPYKFSKVQIALLDKY
YQNKRGILDEDTKEALSKIADIPAKNAVIWFQNARKRQRDGEYTPGEHQA
KIQK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010598XLOC_010598Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018908TCONS_00018908Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 33..95
e-value: 7.9E-4
score: 25.5
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 38..89
e-value: 7.6E-8
score: 32.0
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 30..91
score: 10.268
NoneNo IPR availableGENE3D1.10.10.60coord: 25..94
e-value: 3.8E-9
score: 35.7
NoneNo IPR availableCDDcd00086homeodomaincoord: 35..89
e-value: 2.95028E-4
score: 33.7561
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 35..93

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018908-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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