TCONS_00018906-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018906-protein
Unique NameTCONS_00018906-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length228

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018906-protein ID=TCONS_00018906-protein|Name=TCONS_00018906-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MIEINYKDFFVPEIPSSAFYIPNFITKEEEANLVKNIQQAPKPKWTQLSN
RRLQNWGGLPHEKGMIPEKVPPWLDVYFKKLYSMNIFDGKKPNHALVNEY
LPGQGIMPHVDGPAFYPTISTINLGSHTLLDFYKPLTENEGEDISLSSRY
VGSFLLEPRSLVCFKDDMYHHYLHGIEERTTDILSEKNILNKTDDMNLSE
MKTRETRISVTIRHFPKILNIGLKFGRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010597XLOC_010597Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018906TCONS_00018906Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027450AlkB-like
IPR005123Oxoglu/Fe-dep_dioxygenase
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likePFAMPF135322OG-FeII_Oxy_2coord: 65..213
e-value: 3.1E-14
score: 53.6
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likeGENE3D2.60.120.590coord: 7..219
e-value: 2.4E-42
score: 144.4
IPR005123Oxoglutarate/iron-dependent dioxygenasePROSITEPS51471FE2OG_OXYcoord: 91..216
score: 11.495
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 14..215

Blast
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BLAST of TCONS_00018906-protein vs. Swiss-Prot (Human)
Match: ALKB6 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Homo sapiens GN=ALKBH6 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 8.692e-72
Identity = 106/225 (47.11%), Postives = 140/225 (62.22%), Query Frame = 0 
Query:    9 FFVPEIPSSAFYIPNFITKEEEANLVKNIQQAPKPKWTQLSNRRLQNWGGLPHEKGMIPEKVPPWLDVYFKKLYSMNIFDGKKPNHALVNEYLPGQGIMPHVDGPAFYPTISTINLGSHTLLDFY---KPLTENEGEDISLSSRYVGSFLLEPRSLVCFKDDMYHHYLHGIEERTTDILS---EKNILNKTDDMNLSEMKTRETRISVTIRHFPKILNIGLKFGR 227
            F V + P   +Y+P+FI+KEEE  L++ +  APKPKWTQLS R+LQNWGGLPH +GM+PE++PPWL  Y  K+ ++++F G   NH LVN+YLPG+GIMPH DGP +YPT+STI+LGSHT+LDFY   +P  ++  E      R   S LLEPRSL+  +   Y   LHGI     D L                      R TR+S+TIR  P++L  GL  G+
Sbjct:   14 FRVEQAPPVIYYVPDFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSNLSLFGGLPANHVLVNQYLPGEGIMPHEDGPLYYPTVSTISLGSHTVLDFYEPRRPEDDDPTEQPRPPPRPTTSLLLEPRSLLVLRGPAYTRLLHGIAAARVDALDAASSPPNAAACPSARPGACLVRGTRVSLTIRRVPRVLRAGLLLGK 238
The following BLAST results are available for this feature:
BLAST of TCONS_00018906-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALKB68.692e-7247.11Alpha-ketoglutarate-dependent dioxygenase alkB hom... [more]
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