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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00018883-protein ID=TCONS_00018883-protein|Name=TCONS_00018883-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1627bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00018883-protein vs. Swiss-Prot (Human)
Match: CNGA3 (Cyclic nucleotide-gated cation channel alpha-3 OS=Homo sapiens GN=CNGA3 PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.915e-45 Identity = 139/528 (26.33%), Postives = 256/528 (48.48%), Query Frame = 0
Query: 555 INPNSMFFTTW-TAVTVAVSCVYF---CTLGFNIAFLKDNQILQILNYSFDFFFIVDIYIKMHVCFYNSDGVLVTHPTTTAKNYFRRS-FILDFIAVLPID-AFLLNSSNGVYALGKLNRILHLIPVSQYFQYLD-TPIQSGNSSIVRGIKFGTYMYLLTHLFACFWF----LIGCPNNSSQINMKQQPTSRYDSHGKLHYRSLEYDVNKTYECIINSWAMQEGRDLGGESVYVQYITTMYWAAATTCSVGYGDIHPYVTDE-MLLALVCMIVGVVFYGYIIASAAASLANADVQRARYQQKLDTINRFLKEQHIRADLEKRVKGFYEFMWNRNKGVDLENLFLGLPISLQADITLSLYKDIIESVPLFQGTELGFTKMLSLYIQPLLVPKGEYIVRKGDIGEEMFFINKGVVEVVSEHKVPIIFDTMTPGRFFGEISTI------FKCPRTASIRTQTNVEMFVLKKKHLDVVLSHYPQIKKKIIETAEE---RQRMVAER-AAAFAKKKKEEEDAKKRKEEEDRLK 1060
++P+S + W TA+ + V ++ C F+ + + +L+YS D +++D+ ++ F G++V+ ++Y + F LD ++++P D A+L +N Y + NR+L S+ F++ D T ++ ++ R Y+ ++ H AC +F IG +S P HG+L + YI ++YW+ T ++G + P V DE L +V +VGV+ + I+ + + ++N + RA +Q K+D+I ++++ + + DLE RV +++++W K VD + + LP L+A+I ++++ D ++ V +FQ E G L L ++P + G+YI +KGDIG+EM+ IN+G + VV++ V F ++ G +FGEIS + RTA+IR+ ++F L K L L+ YP+ KK + E + + ++ E A A A K EE ++ D L+
Sbjct: 161 VDPSSNLYYRWLTAIALPVFYNWYLLICRACFDELQSEYLMLWLVLDYSADVLYVLDVLVRARTGFLEQ-GLMVSDTNRLWQHYKTTTQFKLDVLSLVPTDLAYLKVGTN--YPEVRFNRLLKF---SRLFEFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVY-----PNISIPEHGRLSRK---------------------------------YIYSLYWSTLTLTTIG--ETPPPVKDEEYLFVVVDFLVGVLIFATIVGNVGSMISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKSLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEMYIINEGKLAVVADDGV-TQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELARAGADPKDLEEKVEQLGSSLDTLQ 641 HSP 2 Score: 157.918 bits (398), Expect = 1.843e-39 Identity = 133/510 (26.08%), Postives = 237/510 (46.47%), Query Frame = 0
Query: 12 LLFHPKDPFLKRWKIVMTVSAVCFCFFHTYVMAYKTSFGRTGYGTNNTLKAMFALLYLM-----DMMYLIDIYIQIRTAIIDDSAGLCSDSMTLLKRYFKTYNVILDVLTVFPLEILALTAAGNTDKCWILVTFLRANRLVKIYKLFELLQDFLADIHFNVVIVHIIKLAFMILFITHTCGCVWFIQACFGDTCDPDSWA-DAAGITADTSMFDAYTRSIYWAAATMTSTGYGDITAGTSRGEFIVLFVLIIGLLMYGYCLSSIAAILTNSLSAKIEFTGRIIGVTSFMSEQNLNQALIERVERYLGLVWRIHKGQAIPGAELLMGDLPMRLQEEVAYEEMHKIIMKVPIFMNTDDSFMRQLTAKLITYVFMPGDTIVYSGDVGREMYIMRRGLVEVLSKEQ-NVMATLGPGGYFGEVGLI------FGEPRTADVRAKTFCELAMLRKSDLDEVLVNFPLIEKQLEATGSNENVLRK---IKEVAKQAGGTRKANRIDIIDKTRKLRSN 505
++ P RW + + F++ Y++ + F + L++ + +L+L+ D++Y++D+ ++ RT ++ + SD+ L + Y T LDVL++ P ++ L N + +R NRL+K +LFE ++ + I L IL I H C++F + F DSW I + Y S+YW+ T+T+ G F+V+ L+ G+L++ + ++ ++++N +++ EF +I + +M + + + L RV R+ +W K + E+L LP +L+ E+A + KV IF + + + +L KL VF PGD I GD+G+EMYI+ G + V++ + L G YFGE+ ++ G RTA++R+ + +L L K DL E L +P +K LE G +L K I E +AG K D+ +K +L S+
Sbjct: 159 IVVDPSSNLYYRWLTAIALP----VFYNWYLLICRACF--------DELQSEYLMLWLVLDYSADVLYVLDVLVRARTGFLEQGL-MVSDTNRLWQHYKTTTQFKLDVLSLVPTDLAYLKVGTNYPE-------VRFNRLLKFSRLFEFFDRTETRTNYPNMF-RIGNLVLYILIIIHWNACIYFAISKF-IGFGTDSWVYPNISIPEHGRLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVVVDFLV-GVLIFATIVGNVGSMISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKK--TVDEKEVLKS-LPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEMYIINEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEEKG--RQILMKDNLIDEELARAGADPK----DLEEKVEQLGSS 636 HSP 3 Score: 108.612 bits (270), Expect = 7.245e-24 Identity = 86/354 (24.29%), Postives = 169/354 (47.74%), Query Frame = 0
Query: 1158 IVFNIFAEFGFYFEMYLNFHMSYLTKTGDVESDYNQIFEHY-FKGKFCFDAIANFPLQL-FCFVSTSDKMRYYSYLNVVHLIRIKRLRDWFSKYLKKLNINVLLIRLTENLIQITLALQTFACIWYITACPNNQCRPGTWATKRQDNSDPEYLWLPEENYGDCVYWALATMTSAGYGDIHANNLTEKVIATVVMIFGKLLFGFVLGNVASTMANAELLRVLFEERFAAIQTYMKEQTMPLDIQSRVVNFYQYIWRRNRGSSNDSIFNDLPPCLNAELCFELTGEFIKSVPCFKDCELPFIRLLSTKTKLIQFHQDEFITRKGDIGSEMYFIRSGVAKELGEYGLDILIVEADKT 1509
+V + A+ + ++ + +L + G + SD N++++HY +F D ++ P L + V T+ Y + L++ RL ++F + + N + R+ ++ I + + ACI++ + GT + + S PE+ L + Y +YW+ T+T+ G + E + V + G L+F ++GNV S ++N R F+ + +I+ YM+ + + D+++RV+ ++ Y+W + + LP L AE+ + + +K V F+DCE + L K + F ++I +KGDIG EMY I G + + G+ +V +D +
Sbjct: 204 LVLDYSADVLYVLDVLVRARTGFLEQ-GLMVSDTNRLWQHYKTTTQFKLDVLSLVPTDLAYLKVGTN-----YPEVRFNRLLKFSRLFEFFDRTETRTNYPNMF-RIGNLVLYILIIIHWNACIYFAIS---KFIGFGTDSWVYPNISIPEHGRLSRK-YIYSLYWSTLTLTTIGETPPPVKD-EEYLFVVVDFLVGVLIFATIVGNVGSMISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKSLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEMYIINEGKLAVVADDGVTQFVVLSDGS 545 The following BLAST results are available for this feature:
BLAST of TCONS_00018883-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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