TCONS_00018874-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018874-protein
Unique NameTCONS_00018874-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length320

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018874-protein ID=TCONS_00018874-protein|Name=TCONS_00018874-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp
MEKIKFFFIFTTIQVFSPCNGISDGHFSTFQKVAENSKIVIQNGTESFLN
ETVDVELQCLMKRFDSGYLVEVTELSDERFHCRFFKRNFGDVAVVSSAGS
LVYNHVLPELCQDLGKEKPDGDYSIRPYDGEEIEVLCDMTRHGGGWTTIQ
RRFDGSVNFNKEWADYKVGFGEAAGEYWLGLEHIHRITTKYSNMMVRMEA
TAFDGDQAYVVFQNFFVEGEENLYKLHAGTFLEGDASNKIDWEDHDGQYF
STKDNPNDQSIHYNCANYIKGGGWLNSCASYNFNGLYKNSAIDNVDSIFW
KSLKYRTSLKSVSISIKRKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010573XLOC_010573Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018874TCONS_00018874Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 106..319
e-value: 5.6E-52
score: 188.7
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 120..317
e-value: 2.3E-48
score: 164.8
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 102..320
score: 44.26
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 105..317
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 29..246
e-value: 5.2E-50
score: 169.6
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 247..311
e-value: 5.6E-15
score: 54.7

Blast
[Close]
BLAST of TCONS_00018874-protein vs. Swiss-Prot (Human)
Match: FCN1 (Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.587e-36
Identity = 81/214 (37.85%), Postives = 117/214 (54.67%), Query Frame = 0 
Query:  108 PELCQDLGKEK--PDGDYSIRPYDGEEIEVLCDMTRHGGGWTTIQRRFDGSVNFNKEWADYKVGFGEAAGEYWLGLEHIHRITTKYSNMMVRMEATAFDGDQAYVVFQNFFVEGEENLYKLHAGTFLEGDASNKIDWEDHDGQYFSTKDNPNDQSIHYNCANYIKGGGWLNSCASYNFNGLYKNSAIDN-VDSIFWKSLK-YRTSLKSVSISIK 317
            P  C+DL        G ++I   D   + VLCDM   GGGWT  QRR DGSV+F ++WA YK GFG   GE+WLG ++IH +T + S+ + R++   F+G+  +  +++F V  E   YKL  G F+ G A N +    H+  +FSTKD  ND S   NCA   +G  W   C + N NGLY     ++  + I W + K Y+ S K   + ++
Sbjct:  115 PRNCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFGSQLGEFWLGNDNIHALTAQGSSEL-RVDLVDFEGNHQFAKYKSFKVADEAEKYKLVLGAFVGGSAGNSL--TGHNNNFFSTKDQDNDVS-SSNCAEKFQGAWWYADCHASNLNGLYLMGPHESYANGINWSAAKGYKYSYKVSEMKVR 324
The following BLAST results are available for this feature:
BLAST of TCONS_00018874-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN11.587e-3637.85Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2[more]
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