TCONS_00018873-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018873-protein
Unique NameTCONS_00018873-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length235

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018873-protein ID=TCONS_00018873-protein|Name=TCONS_00018873-protein|organism=Clytia hemisphaerica|type=polypeptide|length=235bp
MTLATNSTSSFSALFASLKFGIKRSSKIELSSDSITNVAVDSPSTKLRRQ
ALSLDFSTAEHSTILDELLKIQQNEANTDVKKRHAFSKRKSFSKKQSSIY
NGTESLHNAILNGNVELTRQILLLENVDVNALLPPGWNALHHACRLGNLN
IIKLLLEFGADASIQNEDSLTPLLLAVTNGYFDVAAYLINDGGVSCKEVR
NGFQAAIPYNRKPTELTVFNSRFRKAKSFDFDCER
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010572XLOC_010572Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018873TCONS_00018873Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 151..165
score: 37.98
coord: 102..117
score: 33.15
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 168..198
e-value: 2.6
score: 17.1
coord: 101..131
e-value: 170.0
score: 10.7
coord: 135..164
e-value: 1.8E-4
score: 30.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 135..167
score: 13.037
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 106..195
e-value: 1.0E-16
score: 61.2
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 63..206
e-value: 9.7E-26
score: 89.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 101..192
score: 26.576
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 99..194
NoneNo IPR availableCDDcd00204ANKcoord: 100..192
e-value: 1.01021E-20
score: 83.587

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018873-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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