TCONS_00018835-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018835-protein
Unique NameTCONS_00018835-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length361

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018835-protein ID=TCONS_00018835-protein|Name=TCONS_00018835-protein|organism=Clytia hemisphaerica|type=polypeptide|length=361bp
MKIFVAVCLAFILVEAKKKECNLKCSKDDKQKVCGKDGVTYKSFCHLQLQ
SCHQGKDIGFACDGTCPCDPPEVFQMDQETVKKIQEARSLYQLQKHEKEE
LNSADTFLARELLGEDDLKRHIALKVMEQDKKQECQLSEMAELPTRLIDW
FHVLRINEKVEDMRIQRIEGEPIMKEENFSDEKMKSMYTELACSDHKDQK
VEKAVCLKPVQWMFHHLDANGDNHLSASELSDIEDIQNEKCIKPFLQSCD
HDKDGKVELAEFCRCLCVSPPCTNVIKNVPILMVRGQPAPMPGFFVPRCD
DDGFFMPEQCNPMKECWCVDRNGGELLGTRTKKGSATCDSYNTKNPSSRL
VPLNINNEQGH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010548XLOC_010548Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018835TCONS_00018835Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002350Kazal_dom
IPR000716Thyroglobulin_1
IPR019577SPARC/Testican_Ca-bd-dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005509calcium ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005578proteinaceous extracellular matrix
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0005578 proteinaceous extracellular matrix
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 84..104
NoneNo IPR availableGENE3D1.10.238.10coord: 74..220
e-value: 0.0096
score: 15.3
NoneNo IPR availableGENE3D1.10.238.10coord: 221..267
e-value: 6.1E-9
score: 35.2
NoneNo IPR availableGENE3D3.30.60.30coord: 14..73
e-value: 8.9E-13
score: 47.7
NoneNo IPR availableCDDcd00104KAZAL_FScoord: 25..66
e-value: 6.33881E-7
score: 44.5682
NoneNo IPR availableCDDcd00191TYcoord: 290..338
e-value: 1.74064E-15
score: 69.4149
IPR002350Kazal domainSMARTSM00280kazal_3coord: 20..66
e-value: 4.6E-11
score: 52.7
IPR002350Kazal domainPFAMPF07648Kazal_2coord: 20..66
e-value: 4.1E-9
score: 36.3
IPR002350Kazal domainPROSITEPS51465KAZAL_2coord: 15..67
score: 10.806
IPR002350Kazal domainSUPERFAMILY100895Kazal-type serine protease inhibitorscoord: 17..66
IPR000716Thyroglobulin type-1SMARTSM00211TY_2coord: 296..342
e-value: 1.5E-15
score: 67.6
IPR000716Thyroglobulin type-1GENE3D4.10.800.10coord: 282..338
e-value: 6.2E-15
score: 54.4
IPR000716Thyroglobulin type-1PFAMPF00086Thyroglobulin_1coord: 289..338
e-value: 1.3E-15
score: 56.7
IPR000716Thyroglobulin type-1PROSITEPS00484THYROGLOBULIN_1_1coord: 295..324
IPR000716Thyroglobulin type-1PROSITEPS51162THYROGLOBULIN_1_2coord: 269..338
score: 10.68
IPR000716Thyroglobulin type-1SUPERFAMILY57610Thyroglobulin type-1 domaincoord: 248..341
IPR019577SPARC/Testican, calcium-binding domainPFAMPF10591SPARC_Ca_bdgcoord: 133..265
e-value: 3.8E-26
score: 91.5
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 250..262
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 133..270

Blast
[Close]
BLAST of TCONS_00018835-protein vs. Swiss-Prot (Human)
Match: TICN2 (Testican-2 OS=Homo sapiens GN=SPOCK2 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 5.634e-34
Identity = 95/309 (30.74%), Postives = 129/309 (41.75%), Query Frame = 0 
Query:   33 VCGKDGVTYKSFCHLQLQSCHQGKDIGFACDGTCPCDPPEVFQMDQETVKKIQEARSLYQLQKHEKEELNSADTFLARELLGEDDLKRHIALKVMEQDKKQECQLSEMAELPTRLIDWFHVLRINEKVEDMRIQRIEGEPIMKEENFSDEKMKSMYTELACSDHKDQKVEKAVCLKPVQWMFHHLDANGDNHLSASELSDIEDIQNEKCIKPFLQSCDHDKDGKVELAEFCRCLCV-SPPCTNVIKNVPILMVRGQPAPMPGFFVPRCDDDGFFMPEQCN-PMKECWCVDRNGGELLGTRTKKGSATCD 339
            VCG DG TY S C L+ Q+C   K +   C+G CPC                            E+   ++AD                         K + C   ++A+L  RL DWF +L  N K                 +N S   +    + L        K   A C   + WMF  LD + D  L  +EL+ I   + E CI+PF  SCD  KDG+V  AE+C C     PPC   ++ + I     +    PG F+P CD+DG++   QC+    +CWCVD+ G EL GTRT  GS  CD
Sbjct:  147 VCGSDGHTYSSVCKLEQQACLSSKQLAVRCEGPCPC--------------------------PTEQAATSTADG------------------------KPETCTGQDLADLGDRLRDWFQLLHENSK-----------------QNGSASSVAGPASGL-------DKSLGASCKDSIGWMFSKLDTSADLFLDQTELAAINLDKYEVCIRPFFNSCDTYKDGRVSTAEWCFCFWREKPPCLAELERIQIQEAAKK---KPGIFIPSCDEDGYYRKMQCDQSSGDCWCVDQLGLELTGTRT-HGSPDCD 377
The following BLAST results are available for this feature:
BLAST of TCONS_00018835-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TICN25.634e-3430.74Testican-2 OS=Homo sapiens GN=SPOCK2 PE=1 SV=1[more]
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