TCONS_00018828-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018828-protein
Unique NameTCONS_00018828-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4141

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018828-protein ID=TCONS_00018828-protein|Name=TCONS_00018828-protein|organism=Clytia hemisphaerica|type=polypeptide|length=4141bp
AKSVPGSYIMILDDDKHPCLGIDDSDGKTVVANEKCKDMFYFDNAGHMIH
LNSGRCIKKDGAGGLVADTDSCDQKFTGDGKGEIETSYPDSKCITATNHA
PVVVSGAACSTSTTQYEFLVYKDKEYDYKEFEQRFYKLPAQNLKYKDAKE
ECKKYGLELPMLKTQYELDMWKKLVSDHSLQTSYNMGTHRKDFVDQYVWD
DGTPNDMAPTSGSTRCQKVLSGASLADKNCGSAETNIICQVPGRRFMNYS
DIISSNFHRQRRLSFGSNGFNIAMTNTSEFHALFQVNVAGKYGRLTLNIS
NRLIWNHLGFVFNKKENAILAHANGKIAGKSYLAEALLPRPRNYKYNRIL
LFGQLQYIKSSLNQHSMSELRMWRYPLHGDVFQRMTTSVTYDFSELHWTA
METFKYNFSSVCSDPQQLTGPCNDISTINLQRDLHASAIGVVPRCEWWSG
RGEDIIVDHGKSLSKEECLQTCYDVTSNYSQASSKVNGVSFGVTPTRQST
YGKCLCIFSHGALVNTTNDDASYKTCVFPLPVYYGLVTNGGTVLQIAFTP
NREWIYAIGLNFKLHYLNTVTSVWESKPYDCQQVEVDPSYKKWFRHNNII
KDESGLEYSSADCDSFVVDDQFLGCRKTSKEVYIRSKVFEKSNWTLLTDG
ATQVRVAVDGRWYIYDDSTKDIAEVKRATGEKQIVANALAGGFITFFQSF
DVTPSQKVVIATNMGVFLYIGNNGWVEINNDKDTYYVRAIDDYYAYVLED
GVPRPKQIPLGRIQLPGYSLIPQIEANYELARESCQDQGGDVISNFNTTQ
DFAAAYHMVDKAGQAFFWFGAKDPNTDSDRKFYQLNGNMLIHAPWGVPVE
LANPAEQCVIYKKEYFGDAPCEFTAGTGASSQCQVPVIPWLRTELPVEVS
LVKTPTSCQTVNDGIVEIPKVDGTNGNSATFIFSRTNITQDMTIKNAFLK
FYPSEDSDVNSDVISYLIGLLYRPYDSIDCNDLDDISNQELIIPILWNVS
AEWRTTKPVVSPDISKLINFLVRKKTWNSESTFQILLTPLSTSIQSTRKI
LINQTELVLNYENNFPNRYMLKKSIFSPVPSIDTIIIGPFHPNIQTVSFW
IHMKGPHCGNLFVWTNGNLMMQLSEELADDWKHLWIDVRGNNGEPTEIMF
VSINNQGSKGHFAFDHFVGYPHADLAVHGDEVATYDSKNKTFYIGLLEEF
GIPIPKVMYPFQKDAGDQDFGLFGLNLAWHKARLINEEKYYGTDKYDFLR
HMFYYGAQTERGKQPWAYIYNEDMTPFTSLVDTSSSFTFVTHLKYDDLQL
GYVQDKMQYVRANGTIFMFQNEKTKLTVRDYPEGIAVRVHNSSGHPVVER
FIPIRKHHVYFAISYQNGYGSVYLDDELRTTFQVDHAILTPFPKKLIFFF
DPDDEFELPITATKADSEKQQQTIRNVRFRGSISCFQAFDQALTLQQIKQ
VEFCPNRQGRIYHRKSCEDGGEKIIFNANCVCQDYNNRYITRTCRSALKD
TVYENALEYLPFDIPNKIKGVKNVMDLTTTNPQVQFTSGPVNTGICVNGD
VAVQIGTMSSSCLETLTGTCDSGYAIAVWLFVGEHYFDETIEVFRFNEFS
VEVVFESDESKINQTFNFKMAGCGTLSKVIGIRTVHQYTVIIASAKANYQ
LYIDAEYIGEESCTGSGPWPATQTLTVGGASRVCIDDFAISTSATMNFPE
NFYTSLVKGTFSSDPQVLGLKTQISIPEILVTGPTSDDYLEMFQDTSSES
SQILIETINEIIMQKISYLLPNFYSVQVNKLSYGRENMVRAENVLINFQT
LSLAELQVFEDCPIKLTYNGKDLEINCDGMKPVYGLSQIEVEGVGVTQYK
AEVRVVNRLPIHDSYHLGFKIRLEAITEYGNGTVQEETHYTGVGTFPFDV
ELGKRYNATVWAITHEGVGVGTTHEFISLGDYPHYPPNATAYNTSLTSLN
VSIDNFPEDLWNDIEIWYLLYYKEFDNDPEKDNNITAYTEVRIDRDPNRE
MNHTYAIEGLAIFTNYSILVRVANVNGEGPLFNLSCYTKESTPEAPPELA
ALTPVDNRLEIKWNYTDDIHIWNDFTLEKFGITLTSVFPQNTKIDGPFTY
FVSPDTFTQLSDELDYFRVYRITLTTHTKSGPGPTVDFCQVTNSYYPQGR
PQTVDILGVDRTSMNFSIGQVDVTEEGGVIMNYTITYTSVDWPDTLHTIV
TDSIIHSEANWNIWNSYSSFPPTGCADLPPSSVLMGYNLQDLTPNTNYSF
SVIACNQYGCGQTDNVTTVVYGQTLPDIPSCFPNITLVANTSSESIRVEW
SHLTHFCGYGNLVQYHIGVLDDDLYQEWIQNKSMIDLDLAPTVTQTTENF
TEFDGLKNYWKYSVFVIYENVVGKGPISDLFSTFTAEDVPTSAPFLVTSE
AFNSSALSINITIPIRENRNGIIIGYQVTLVNEIEETFKKNYSVAHLIQW
NNTEPSGDDILTSVLFGDLKAYFNHTVTVQAFTKVGLGPSSEPFISRTGQ
SVPTAPPSNISYSHVTPNSSVIGWMHIPYLNRHGVPSSFILNASGILANG
TLDSLGPFNVSAHPDTPEFDFMIENLFPKTIYNVTLIGCTRIGCGPPTGI
TFETLEMAPSSFPLQITNVNNTEMEKLLVQWSDILSMDKRGIITHYYIQF
TKINHTWDTVDSLPKLQIVRLSSNDNDSMTTYDRTEIVPLEGHFILDEEL
FYSTWLTGLGDLENYTDYKISIAGKTSAGVGPYSPEFVFRTVENVPSFYP
VINSTGEVSAFEVFVRFPNLTRPYHQGVLLGYKVYYQEIDLIQDCIDGGY
HFTTNCSLRMSSINKTIIELETPEIDLFAPPPIPGEEDEIDENIYEMILF
DLLPGVNYTVCLTAFTVAGVGPEYCTWARTEDAIHGNWTDWTDWGNCDQT
CGQGIQMRYRWCINPVPDNGGDYCVGDGNETRWCNEIPCDGYYLANSYTN
CNQTCSSVSEDFLCIPTFTPFTRDLHNFPRDPNHYNRTIEVTCEPTHNNH
SQSIHPSFDMTDKSCQGFEHPPKMIDCASKPDSPTDRRLCYCGDEDVMNF
LEWGLWSPCTKSCAIGTRKRSRECAVDDEARFCPEEKMSDTQDCNAFPCP
INGQWGNWTDFGACTVACGFGRRYRQRECNNPKPALGGEDCPFGVVVDFL
EGCNAYPCPIHGGWGAWYEIEECTQPCGLGGVERQRRYCNSPLPQYDGRP
CNGPSERFYKCNEHIVCENELAITYKLRFINETWDYRLVYDNTNEFRDFS
TRLTDNINLLHSNNSDKIKDTILDVTCNKLERGSVIANFTIRYWEISSAQ
IVLMQHAIEEDKFINDMPLQKINISSDQVPSMLLHATAQSYSPFSINVTW
SDLNVNTSELYLYYIFWRQLAVEPATWSVKGFNNTGPNQLIDLLPATWYG
IRISASFQSGNGIATEEIKVITLEGAPYIGPPNMTADINGQTSVFISWLP
ISSSQVPGNLLGYRLRYKLYHDSRNQSQVITLDAFTHNRMLTGLKAFSYY
WIEVVGFTNAGEGPHSLVVIKTPPGPPDIAPPNATMSDKYHINEIKVQWD
AIPREFENGRISGYKVTWELHQKFGRDVPVNEETVPEEAFDRFTLGYTIK
GLHANSIYKVSLFGYSPQGDGPKHVEYVSTCKCPPIIYNNFFNSQPYIDY
NKKLIEMAGLFPHLLQMIITNVCTGTCNSYNHSVIYYDRTSSGDPSSKKN
EVGVRKKIGQSAHMNFPIQGLVSMKKFQGDHPFVSLVPFQGTAFVVFHEA
VKSVGFIGLFKAVFNAWAVVVISCLMAWLCGCVYWFTEQTSETSEINLQS
ALIGQIQGFWISFITMTTVGYGDINPSTFPSKVLMILWALIGLVVFGLTM
GVIGSGLVVNTQPATLKIYGTPTAVIEGTFENRLAIYRNADLTHNKTYED
VLSVLRDVADKKIELALIDANSLAGYENEMKRLSLAIGKIYVTESCFGVV
LTDGFEAMEDDVRSFVMSQSAEISAFISSKVAQLEPYSLEVEEKILTDEE
FNSLFVNCGILLIVLSFFGMLHTLRLHLKSKSEVHPEDHEDSEFILSEIE
SLVDDFNESFESKVEGLENRHTTELQHLASLHQNYKRLLLRKGFEKGKVV
HALENTHQKAAHKIVKVKTKEKYERILKKQEYFNMKEQEEK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010546XLOC_010546Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018828TCONS_00018828Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR000884TSP1_rpt
IPR001304C-type_lectin-like
IPR013783Ig-like_fold
IPR016186C-type_lectin-like/link
IPR013099K_chnl_dom
IPR013320ConA-like_dom
IPR016187CTDL_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 2503..2595
e-value: 0.14
score: 21.3
coord: 2279..2375
e-value: 0.046
score: 22.9
coord: 1933..2029
e-value: 0.48
score: 19.5
coord: 2148..2261
e-value: 3.9E-4
score: 29.7
coord: 2043..2133
e-value: 44.0
score: 5.9
coord: 2607..2731
e-value: 4.0
score: 14.9
coord: 2391..2488
e-value: 1.2
score: 18.2
coord: 3523..3621
e-value: 0.03
score: 23.5
coord: 2809..2871
e-value: 150.0
score: 1.3
coord: 3330..3412
e-value: 33.0
score: 7.0
coord: 3428..3513
e-value: 0.035
score: 23.3
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 3431..3516
e-value: 2.1E-6
score: 27.9
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 3430..3526
score: 16.489
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 3530..3636
score: 11.061
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 2150..2277
score: 9.791
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 2281..2388
score: 10.422
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 3329..3425
score: 11.306
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1935..2045
score: 10.052
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 2393..2501
score: 11.843
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 2506..2610
score: 11.543
IPR003961Fibronectin type IIICDDcd00063FN3coord: 3431..3522
e-value: 2.88608E-7
score: 50.5727
IPR003961Fibronectin type IIICDDcd00063FN3coord: 2276..2385
e-value: 0.00596372
score: 37.0907
IPR003961Fibronectin type IIICDDcd00063FN3coord: 2392..2498
e-value: 0.00160931
score: 39.0167
IPR003961Fibronectin type IIICDDcd00063FN3coord: 2149..2270
e-value: 7.26042E-4
score: 40.1723
IPR003961Fibronectin type IIICDDcd00063FN3coord: 3543..3622
e-value: 2.10476E-4
score: 41.7131
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 2447..2602
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 2620..2658
coord: 2702..2787
coord: 2832..2872
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 2042..2188
coord: 2227..2274
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 2283..2503
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 1926..2036
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 3329..3527
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 3490..3623
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 2888..2940
e-value: 1.9E-15
score: 67.3
coord: 3164..3218
e-value: 1.6E-4
score: 31.0
coord: 3105..3159
e-value: 4.3E-9
score: 46.2
coord: 3050..3100
e-value: 2.0E-9
score: 47.3
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 3048..3100
e-value: 4.6E-10
score: 39.2
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 3101..3158
e-value: 4.2E-11
score: 42.5
coord: 2885..2939
e-value: 5.6E-15
score: 54.9
coord: 3160..3215
e-value: 4.3E-10
score: 39.2
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 3106..3158
e-value: 9.9E-6
score: 25.6
coord: 3166..3213
e-value: 4.4E-6
score: 26.7
coord: 3052..3099
e-value: 3.7E-6
score: 27.0
coord: 2890..2939
e-value: 1.5E-9
score: 37.8
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 2885..2940
score: 13.036
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 3161..3218
score: 9.998
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 3047..3100
score: 10.41
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 3102..3159
score: 10.987
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 3157..3214
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 3098..3158
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 3051..3099
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 2884..2939
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 143..240
e-value: 2.6E-6
score: 28.0
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 768..872
score: 9.972
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2196..2277
e-value: 2.1E-6
score: 27.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2041..2195
e-value: 0.0019
score: 17.5
coord: 1840..2040
e-value: 2.8E-8
score: 33.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2278..2386
e-value: 4.9E-8
score: 32.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 3523..3630
e-value: 2.1E-8
score: 33.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2498..2605
e-value: 8.1E-8
score: 31.9
coord: 2606..2749
e-value: 2.5E-10
score: 40.0
coord: 2387..2497
e-value: 1.2E-9
score: 37.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 3424..3522
e-value: 6.0E-14
score: 51.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 3324..3423
e-value: 6.0E-6
score: 25.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2754..2884
e-value: 0.0058
score: 16.3
NoneNo IPR availableGENE3D2.60.120.200coord: 925..1173
e-value: 6.5E-6
score: 25.7
NoneNo IPR availableGENE3D2.60.120.200coord: 1531..1695
e-value: 0.0041
score: 16.5
NoneNo IPR availableGENE3D1.10.287.70coord: 3755..4133
e-value: 1.6E-20
score: 72.6
NoneNo IPR availableGENE3D2.60.120.200coord: 1271..1451
e-value: 8.9E-6
score: 25.3
NoneNo IPR availableCDDcd00037CLECTcoord: 768..876
e-value: 6.93297E-4
score: 40.2958
NoneNo IPR availableCDDcd00037CLECTcoord: 136..204
e-value: 1.50452E-4
score: 42.2218
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 3759..3859
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 123..247
e-value: 7.1E-12
score: 45.1
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 762..884
e-value: 3.9E-5
score: 23.1
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 3804..3856
e-value: 1.6E-10
score: 40.7
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 1093..1168
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 118..242
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 773..874

Blast
[Close]
BLAST of TCONS_00018828-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 2.039e-42
Identity = 106/346 (30.64%), Postives = 163/346 (47.11%), Query Frame = 0 
Query: 2884 IHGNWTDWTDWGNCDQTCGQGIQMRYRWCINPVPDNGGDYCVGDGNETRWCNEIPC--DGYYLANS-YTNCNQTCSSVSEDFLCIPTFTPFTRDLHNFPRDPNHYNRTIEVTCE----PTHNNHSQSIHPSFDMTDKSCQGFE-------HPPKMIDCASKPDSPTDRRLCYCGDEDVM-NFLEWGLWSPCTKSCAIGTRKRSRECAVDDEARFCPEEKMSDTQD--CNAFPCPINGQWGNWTDFGACTVACGFGRRYRQRECNNPKPALGGEDCPFGVVVDFLEGCNAYPCPIHGGWGAWYEIEECTQPCGLGGVERQRRYCNSPLPQYDGRPCNGPSERFYKCN 3212
            +HG ++ W+ W  C  TCG+GIQ R R C  P+P NGG  C G   E R C   PC  DG +   S +  C ++C   ++      T T     + +  R P   N    + C     P H   S +  P    ++   +G +       +PP     +    + T  ++C   +  +   +  W  WS C+ SC  G R+R+R C+         + + SD Q   CN+ PCP +G W  W+ +G C+  C  G+  R R C+NP P+ GG  C  G     ++ CN   CP+ G WG+W+   +C+  CG GG + ++R C+ P+P   GRPC G + +  +CN
Sbjct: 4528 VHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTR----TRTCNNPSVQHGGR-PCEGNAVEIIMCNIRPCPVHGAWS-AWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRAC--GGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCG-GGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCN 4864

HSP 2 Score: 129.413 bits (324), Expect = 3.602e-29
Identity = 61/167 (36.53%), Postives = 84/167 (50.30%), Query Frame = 0 
Query: 3050 FLEWGLWSPCTKSCAIGTRKRSRECAVDDEARFCPEEKMSD--TQDCNAFPCPINGQWGNWTDFGACTVACGFGRRYRQRECNNPKPALGGEDCPFGVVVDFLEGCNAYPCPIHGGWGAWYEIEECTQPCGLGGVERQRRYCNSPLPQYDGRPCNGPSERFYKCNEH 3214
            F +W  W  C+ +C  G +KRSR C     A      + SD   ++C   PCP++G W  W+ +  CT +CG G + R R CNNP    GG  C    V   +  CN  PCP+HG W AW     C++ CG  G + + R CN+P P + G  C+G   +   CNE 
Sbjct: 4532 FSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIM--CNIRPCPVHGAWSAWQPWGTCSESCG-KGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNER 4695
The following BLAST results are available for this feature:
BLAST of TCONS_00018828-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN12.039e-4230.64Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
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