TCONS_00018810-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00018810-protein
Unique Name	TCONS_00018810-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	488

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00018810-protein ID=TCONS_00018810-protein|Name=TCONS_00018810-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
MRWIMRMKLKYLLLIIVLTFLSLLTVLQLLHGGEDQVEFLDEGEGHGEEE
EHGGGSNHIPDYILEEEALPPADTLEELDNGNWHDFAVDRVRRPVIGAKE
QAEKEDLPFIVWWTPFTGETGRIKKCFVGDCYFSQDRELMTHPKTKAFLF
YGTDFSVKDLPLPKKRHHEWGLTHEESPKNNAIFYHEQGMNVFNHTCTFK
QQSSYPISTQYIRSMKYLLKPLTYTTAEREEFKRSEGLAAVAYVQSGCNP
PSDRDAYVKELMKYIKIDSYGKCLHNKDLPKVLLDPLTMFDKAYLKFFEK
YKFIISFENARCNDYMTEKIFRTIHMGSVPIYLGASNLREWLPDPKSVIM
VEDFKSPKDLAEHIKYLDENSSEYEKLLEYKTKGNDNKKLEKVLEERQWG
VDTGRKMNMVTGFECHVCDQIHRNRNRQKAGQPILQYRATLEHYGCPKPT
QFPFPDVPGSQDWERKNWLWDYDGGKEQALKMKRKMGS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010539	XLOC_010539	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00018810	TCONS_00018810	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001503	Glyco_trans_10
IPR031481	Glyco_tran_10_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0008417	fucosyltransferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006486	protein glycosylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006486	protein glycosylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0008417	fucosyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001503	Glycosyl transferase family 10	PFAM	PF00852	Glyco_transf_10	coord: 240..430 e-value: 1.9E-36 score: 125.4
IPR031481	Fucosyltransferase, N-terminal	PFAM	PF17039	Glyco_tran_10_N	coord: 110..205 e-value: 1.7E-11 score: 44.5
None	No IPR available	SUPERFAMILY	53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 99..423

Blast

[Close]

BLAST of TCONS_00018810-protein vs. Swiss-Prot (Human)
Match: FUT10 (Alpha-(1,3)-fucosyltransferase 10 OS=Homo sapiens GN=FUT10 PE=2 SV=2)

HSP 1 Score: 352.829 bits (904), Expect = 3.552e-117
Identity = 167/389 (42.93%), Postives = 252/389 (64.78%), Query Frame = 0

Query:   99 KEQAEKEDLPFIVWWTPFTGETGRIKKCFVGDCYFSQDRELMTHPKTKAFLFYGTDFSVKDLPLPKKRHHEWGLTHEESPKNNAIFYHEQGMNVFNHTCTFKQQSSYPISTQYIRSMKYLLKPLTYTTAEREEFKRSEGLAAVAYVQSGCNPPSDRDAYVKELMKYIKIDSYGKCLHNKDLPKVLLDPLTMFDKAYLKFFEKYKFIISFENARCNDYMTEKIFRTIHMGSVPIYLGASNLREWLPDPKSVIMVEDFKSPKDLAEHIKYLDENSSEYEKLLEYKTKGN-DNKKLEKVLEERQWGVDTGRKMNMVTGFECHVCDQIHRNRNRQKAGQPILQYRATLEHYGCPKPTQFPFPDV---PGSQDWERKNWLWDYDGGKEQALKMK 483
            K + E +  P ++WW+P TGETGR+ +C    C+F+ +R  + H  TKAFLFYGTDF++  LPLP+K HH+W + HEESPKNN   +H+  + +FN+T TF + S  P++TQY+ S++ +LK L Y    + + K  + LA + YVQS C+PPSDRD+YV+ELM YI++DSYG+CL NKDLP+ L +P +M    + +   +YKFI++FENA C+DY+TEK +R + +G VP+Y G+ ++ +WLP  KS I+V +F  P++LA +I+ LD +   YE  +E+K KG   N++L   L ER+WGV    + N +  FEC VC ++  N   Q+ G P  ++ A   H  CP+PT F F  +   P S    R+ W+  ++  K++A  ++
Sbjct:   73 KRKWELDSYPIMLWWSPLTGETGRLGQCGADACFFTINRTYLHHHMTKAFLFYGTDFNIDSLPLPRKAHHDWAVFHEESPKNNYKLFHKPVITLFNYTATFSRHSHLPLTTQYLESIE-VLKSLRYLVPLQSKNKLRKRLAPLVYVQSDCDPPSDRDSYVRELMTYIEVDSYGECLRNKDLPQQLKNPASMDADGFYRIIAQYKFILAFENAVCDDYITEKFWRPLKLGVVPVYYGSPSITDWLPSNKSAILVSEFSHPRELASYIRRLDSDDRLYEAYVEWKLKGEISNQRLLTALRERKWGVQDVNQDNYIDAFECMVCTKVWANIRLQEKGLPPKRWEAEDTHLSCPEPTVFAFSPLRTPPLSS--LREMWISSFEQSKKEAQALR 458

The following BLAST results are available for this feature:

BLAST of TCONS_00018810-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00018810-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FUT10	3.552e-117	42.93	Alpha-(1,3)-fucosyltransferase 10 OS=Homo sapiens ...	[more]

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TCONS_00018810-protein (polypeptide) - C. hemisphaerica