TCONS_00018802-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018802-protein
Unique NameTCONS_00018802-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length312

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018802-protein ID=TCONS_00018802-protein|Name=TCONS_00018802-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MEFTRSTVHSLLITGYSLTIAGGAPANIFILYLFIRYKEIQTFSNSLLIS
LSIGDLLTSVILSPLTIAEIQKVQSNLIQNLARYLTGLIAISGYTLISIS
FYRFIKISQTEFHRRIKLKKVLLFVVPWCAPALYIVTKRLNRVLNNFIVI
LSIPACFLIVYVYSRKTQNILKRNWVDAQNDVIKQKALKRNQKALTLINW
VVAMTFLSSSGMVVMRSILITEDFIDPEEWALIKAWEYEIVQTGRLVWCI
NAIVNPLLYFWKHPMFRKKASLVLKRKRLRLVMHPKIAVVEPTDHGGECK
HESATDEYSRFS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010531XLOC_010531Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018802TCONS_00018802Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 85..107
score: 22.68
coord: 241..267
score: 23.47
coord: 11..35
score: 17.67
coord: 44..65
score: 28.3
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 27..259
e-value: 3.4E-8
score: 33.0
NoneNo IPR availableGENE3D1.20.1070.10coord: 141..279
e-value: 8.0E-6
score: 24.4
coord: 2..140
e-value: 7.4E-12
score: 44.2
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 6..281
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 26..128
score: 9.86

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018802-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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