TCONS_00018760-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018760-protein
Unique NameTCONS_00018760-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length346

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018760-protein ID=TCONS_00018760-protein|Name=TCONS_00018760-protein|organism=Clytia hemisphaerica|type=polypeptide|length=346bp
MVMDQYKSDLLELSQEFQSKIKQNSLIGSFDIAHTVVLLFRKVVGKVNWI
NAKELIECVRFLGKSLFEMNPSEVIINMVKRVSKLIREEYFGASGTNIEG
SSSLQTILMANNHSSDDLTLVVPGLKSVVIDSINELISELETSRSNIALK
SSEYIHSNEIIMTYGKSRTVELFLKKAFLKRKFSVIVAECAPFFHGQELA
KSLAEHGIETTVIPDSAVFAIMSRVNKVIIGAHTVYADGGLKASNGAQSM
ALAAKHHAVPVIVCSALFKLTPKFVNQEHGGDFVSPELSLDFNMKPRDFD
FETTTPKFTYIKPDTVDLLITDVGGNSPSYVYRLVAELYQQEDDDF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010504XLOC_010504Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018760TCONS_00018760Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000649IF-2B-related
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000649Initiation factor 2B-relatedPFAMPF01008IF-2Bcoord: 28..328
e-value: 5.0E-56
score: 189.9
NoneNo IPR availableGENE3D3.40.50.10470coord: 141..346
e-value: 2.7E-56
score: 189.5
NoneNo IPR availableSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 5..90
coord: 125..339

Blast
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BLAST of TCONS_00018760-protein vs. Swiss-Prot (Human)
Match: EI2BB (Translation initiation factor eIF-2B subunit beta OS=Homo sapiens GN=EIF2B2 PE=1 SV=3)

HSP 1 Score: 288.5 bits (737), Expect = 8.052e-96
Identity = 155/340 (45.59%), Postives = 221/340 (65.00%), Query Frame = 0 
Query:   12 ELSQEFQSKIKQNSLIG----SFDIAHTVVLLFRKVVGKVNWINAKELIECVRFLGKSLFEMNPSEVII-NMVKRVSKLIREEYFGASGTNIEG--SSSLQTILMANNHSSDDLTLVVPGLKSVVIDSINELISELETSRSNIALKSSEYIHSNEIIMTYGKSRTVELFLKKAFLKRKFSVIVAECAPFFHGQELAKSLAEHGIETTVIPDSAVFAIMSRVNKVIIGAHTVYADGGLKASNGAQSMALAAKHHAVPVIVCSALFKLTPKFVNQEHG-GDFVSPELSLDFNMKPRDFDFETTTPKFTYIKPDTVDLLITDVGGNSPSYVYRLVAELYQQED 343
            ELS+  +S ++     G    S ++A   + L R+++    W NA EL+E +R  G+ +    PSE  + NMV+RV K+IREEY    G + E     SL  +L +    ++D +     L+S +I++INEL+ ELE +  NIA ++ E+IHSNE+IMT G SRTVE FLK+A  KRKF VIVAECAPF  G E+A +L++ GIETTV+ D+A+FA+MSRVNKVIIG  T+ A+G L+A  G  ++ALAAKHH+ P+IVC+ +FKL+P+F N+E     FV+PE  L F             P F Y+ P+ + L I+++GGN+PSY+YRL++ELY  +D
Sbjct:   10 ELSERIESFVETLKRGGGPRSSEEMARETLGLLRQIITDHRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLKIIREEYGRLHGRSDESDQQESLHKLLTSGG-LNEDFSFHYAQLQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFHVIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAVTGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDILEKVSVHCPVFDYVPPELITLFISNIGGNAPSYIYRLMSELYHPDD 348
The following BLAST results are available for this feature:
BLAST of TCONS_00018760-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EI2BB8.052e-9645.59Translation initiation factor eIF-2B subunit beta ... [more]
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