TCONS_00018626-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018626-protein
Unique NameTCONS_00018626-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length286

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018626-protein ID=TCONS_00018626-protein|Name=TCONS_00018626-protein|organism=Clytia hemisphaerica|type=polypeptide|length=286bp
FIIFPCAFLDLDLYFLMTSKEVHTSILTSLLAGSCGGISTDIVLFPLDSI
KTRAQTQAGFWKSGGFKGLFRGVGSVALGSAPSGASFFFAYEGVKNLTKS
NMSPLASHLLAASCGEVFSCMFRIPFEVVKQTAQANKSLNSLDALKFIVK
RDGLAGLTRGFFSMVSREIPFTVIQFPLWEHLKTLAAKDDKPCTPLASAV
AGSFAGGFAAALTTPMDVAKTRIILVQNEGSHGGNPYKVMYSIGKTEGIA
RLFSGIVPRVVWISIGGFIFLGTYEKSKQILQDLGI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010413XLOC_010413Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018626TCONS_00018626Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 60..281
e-value: 1.2E-53
score: 181.3
coord: 8..59
e-value: 6.0E-7
score: 28.0
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 25..275
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 194..282
e-value: 6.3E-19
score: 67.6
coord: 104..189
e-value: 1.2E-10
score: 41.0
coord: 60..100
e-value: 1.3E-6
score: 28.1
coord: 24..58
e-value: 3.8E-6
score: 26.6
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 193..280
score: 17.536
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 24..97
score: 14.575
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 103..185
score: 16.141

Blast
[Close]
BLAST of TCONS_00018626-protein vs. Swiss-Prot (Human)
Match: SAMC (S-adenosylmethionine mitochondrial carrier protein OS=Homo sapiens GN=SLC25A26 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 6.690e-73
Identity = 127/265 (47.92%), Postives = 181/265 (68.30%), Query Frame = 0 
Query:   27 LTSLLAGSCGGISTDIVLFPLDSIKTRAQTQAGFWKSGGFKGLFRGVGSVALGSAPSGASFFFAYEGVKNL----TKSNMSPLASHLLAASCGEVFSCMFRIPFEVVKQTAQANKSLNSLDALKFIVKRDGLAGLTRGFFSMVSREIPFTVIQFPLWEHLKTL-AAKDDKPCTPLASAVAGSFAGGFAAALTTPMDVAKTRIILVQNEGSHG-GNPYKVMYSIGKTEGIARLFSGIVPRVVWISIGGFIFLGTYEKSKQILQDLG 285
            + +L+AG   G+S D++LFPLD+IKTR Q+  GF K+GGF G++ GV S A+GS P+ A+FF  YE VK      + S ++P+  H+LAAS GEV +C+ R+P EVVKQ AQ + S  +      I+  +G+ GL RG+ S V REIPF+++QFPLWE LK L + + D       SAV G+FAGGFAAA+TTP+DVAKTRI L +   S   GN   V++ + +++G+A LF+G+ PR+  IS+GGFIFLG Y+++  +L ++G
Sbjct:    7 VAALVAGGVAGVSVDLILFPLDTIKTRLQSPQGFNKAGGFHGIYAGVPSAAIGSFPNAAAFFITYEYVKWFLHADSSSYLTPM-KHMLAASAGEVVACLIRVPSEVVKQRAQVSASTRTFQIFSNILYEEGIQGLYRGYKSTVLREIPFSLVQFPLWESLKALWSWRQDHVVDSWQSAVCGAFAGGFAAAVTTPLDVAKTRITLAKAGSSTADGNVLSVLHGVWRSQGLAGLFAGVFPRMAAISLGGFIFLGAYDRTHSLLLEVG 270
The following BLAST results are available for this feature:
BLAST of TCONS_00018626-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SAMC6.690e-7347.92S-adenosylmethionine mitochondrial carrier protein... [more]
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