TCONS_00018574-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00018574-protein
Unique Name	TCONS_00018574-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	748

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00018574-protein ID=TCONS_00018574-protein|Name=TCONS_00018574-protein|organism=Clytia hemisphaerica|type=polypeptide|length=748bp
MDFSKFSDDNFDVKDWVNHALQPPKDTNVSVENYASNLVMKLQLFIQEVS
KSLEETSQVALNNIPRVLREVENIKIETSLLKNQMSMVKDDIRKVEENTA
SSMKKLVEIDGVKCRMQDACNALQEADKWTILSSEADESFERGDLNQVAE
KLIGMQKSLEVLKDVPDYNERLKVLQNHKNKLEALLSPTLVQIFNKHDLD
DARHYVELFAQLDRLPQLQLYYNNCHKSSLFKTWRSVREDPNKPMTSWLP
IFFDHLLALWHREISWCGQVFPDPIQALCVLMSQTLNSVKPSINDCIIET
LRDGEDNLDTLIQLQNGTSRFVQGLEKAVGTFQGNLTTEKNAHLEQLLLV
IRSAFTEYLLQYSQLQQTQLMTVIDAFSVESLELSDCAESLSDYIADAFK
SADKALDSCLKFTNAYGSVGLIDAYKIFFSAFFGCINEVLHKLRKHYSLD
VDSKQDGSQSLDDTTKQWSNFQYAFKMIEMCGLLLLKTQEFRQRVFDELN
VCVEQIVHENGEQTPSNNYLKSHPTEWDKVVELQQMMLTYEMEAILPSIN
EHVKKLNEQSHHFAFDIIFIHFKRQLLTVPKMEIWCRSEKESVDGALPTF
SLSPLPYITHIGDSLLTLPQQLEPFFVQDQNNNLLTALKVGQIPYQEQDG
AHYDHQWLESFARGAMNVYAEAILKVTMVTPYATRQLIADIEYFFNILSA
LEIEPIGELQQIKQLLETDGEEFTSIAQKQSMDEGLVKTICKMRKIIL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010383	XLOC_010383	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00018574	TCONS_00018574	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019335	COG7

Vocabulary: **Cellular Component**
Term	Definition
GO:0017119	Golgi transport complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0017119	Golgi transport complex

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 165..185
IPR019335	Conserved oligomeric Golgi complex subunit 7	PFAM	PF10191	COG7	coord: 2..745 e-value: 1.1E-183 score: 612.4

Blast

[Close]

BLAST of TCONS_00018574-protein vs. Swiss-Prot (Human)
Match: COG7 (Conserved oligomeric Golgi complex subunit 7 OS=Homo sapiens GN=COG7 PE=1 SV=1)

HSP 1 Score: 474.552 bits (1220), Expect = 4.451e-157
Identity = 278/784 (35.46%), Postives = 441/784 (56.25%), Query Frame = 0

Query:    1 MDFSKFSDDNFDVKDWVNHALQPPKDTNVS--VENYASNLVMKLQLFIQEVSKSLEETSQVALNNIPRVLREVENIKIETSLLKNQMSMVKDDIRKVEENTASSMKKLVEIDGVKCRMQDACNALQEADKWTILSSEADESFERGDLNQVAEKLIGMQKSLEVLKDVPDYNERLKVLQNHKNKLEALLSPTLVQIFNKHDLDDARHYVELFAQLDRLPQLQLYYNNCHKSSLFKTWRSVREDPNKPMTSWLPIFFDHLLALWHREISWCGQVFPDPIQALCVLMSQTLNSVKPSINDCIIETL-RDG-EDNLDTLIQLQNGTSRFVQGLEKAVGTFQGNLTTEKNAHLEQLLLVIRSAFTEYLLQYSQLQQTQLMTVIDAFSVESLELSDCAESLSDYIADAFKSADKALDSCLKFTNAYGSVGLIDAYKIFFSAFFGCINEVLHKLRKHYSLDVDSKQDGSQSLDDTTKQWSNFQYAFKMIEMCGLLLLKTQEFRQRVFDEL---------NVCV--------EQIV--HENGEQTP--SNNYL-KSHPTEWDKVVELQQMMLTYEMEA-----ILPSINEHVKKLNEQSHHFAFDIIFIHFKRQLLTVPKMEIWCRSE-KESVDGALPTFSLSPLPYITHIGDSLLTLPQQLEPFFVQDQNNNLLTALKVGQIPYQEQDGAHYDH------QWLESFARGAMNVYAEAILKVTMVTPYATRQLIADIEYFFNILSALEIEPIGELQQIKQLLETDGEEFTSIAQKQSMDEGLVKTICKMRKI 746
            MDFSKF  D+FDVK+W+N A +       S   + +A+ LVMKLQLFIQEV+ ++EETS  AL N+P+VLR+VE +K E S LK QM +VK+DI+K E++T+ SM+ LVEID VK RMQ A  +LQEADKW+ LS++ +E+F+  D+  ++ KL GMQ SL +L D PDY+E+   L+  KN+LEAL SP +V  F    +D ++ +V++F ++DR+PQL  YY  CHK  L   W+ + +  +  +   L   +D LL  WH +I W  QVF  P + + VL+ QTL ++ PS+  C+   + R G E  L  L++  + T+ F +GLE A+     +L       + +L+  +   +  Y L+Y  ++++ L+  + A  +E  E+ DC + LS  +   F  A  A+D C++FTN  G+ GL+ A K  F+ +       L  +RK   LD        Q      + W+ FQ + ++I  CG LL    +F Q++ + +         + C         E I+   +N  + P    NYL K +P E+  ++E+   + T + +      +L +    + +LN+Q+H  AFD +F+  K+QLL + KM+ W  +   E++   LP FSL+PL YI++IG  +++LP  LEPF  Q+ ++ L  AL  G++P+  + G            WL S AR  M  Y +AIL++  ++P++ +QL  DI+Y  N++ AL ++P   LQ I  LL+T  E++  ++  + +   L  T+  MR +
Sbjct:    1 MDFSKFLADDFDVKEWINAAFRAGSKEAASGKADGHAATLVMKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQLAAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEALKNRLEALASPQIVAAFTSQAVDQSKVFVKVFTEIDRMPQLLAYYYKCHKVQLLAAWQELCQS-DLSLDRQLTGLYDALLGAWHTQIQWATQVFQKPHEVVMVLLIQTLGALMPSLPSCLSNGVERAGPEQELTRLLEFYDATAHFAKGLEMAL---LPHLHEHNLVKVTELVDAVYDPYKPYQLKYGDMEESNLLIQMSAVPLEHGEVIDCVQELSHSVNKLFGLASAAVDRCVRFTNGLGTCGLLSALKSLFAKYVSDFTSTLQSIRKKCKLDHIPPNSLFQ------EDWTAFQNSIRIIATCGELLRHCGDFEQQLANRILSTAGKYLSDSCSPRSLAGFQESILTDKKNSAKNPWQEYNYLQKDNPAEYASLMEI---LYTLKEKGSSNHNLLAAPRAALTRLNQQAHQLAFDSVFLRIKQQLLLISKMDSWNTAGIGETLTDELPAFSLTPLEYISNIGQYIMSLPLNLEPFVTQE-DSALELALHAGKLPFPPEQGDELPELDNMADNWLGSIARATMQTYCDAILQIPELSPHSAKQLATDIDYLINVMDALGLQPSRTLQHIVTLLKTRPEDYRQVS--KGLPRRLATTVATMRSV 768

The following BLAST results are available for this feature:

BLAST of TCONS_00018574-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00018574-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
COG7	4.451e-157	35.46	Conserved oligomeric Golgi complex subunit 7 OS=Ho...	[more]

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TCONS_00018574-protein (polypeptide) - C. hemisphaerica