TCONS_00018194-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018194-protein
Unique NameTCONS_00018194-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1222

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018194-protein ID=TCONS_00018194-protein|Name=TCONS_00018194-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1222bp
MAASMKWKCVKEPSGPSPKPRHGHRAVAIRDLIVIFGGGNEGIVEELHVY
NTATNQWFVPAVQGDIPPGCAAFGFVCDGTRLLIFGGMVEYGRYSNELYE
LQASRWEWKHLHPKAPANNITPCARLGHSFTLVGKRVFLFGGLANDSEDP
RSNIPRYLNDLYTLDLSQHDNLQWDVPCTYGQPPTPRESHSAVLHTAENG
KHPRLFIYGGMSGCRLGDVYILDVEKMLWSKPVIHGIAPLPRSLHTAVMI
GKRMFVFGGWVPLIVEDGRSSHEKEWKCTNTLACLNVEKLRWETINVEGA
DDQMPKPRAGHAAVNVHTRMYIWSGRDGYRRAWNNQVENVCCKDLWFLET
ERPPAPSRVQLVRATTTTLEVCWGTIPTADAYIIQIQKYEVNPTPTTSTT
TNNTANNSTTAKPITSSTATTNTTQLLSNANIIRLPSTGQSLASTLTNLS
SVTSLAGVSKTLGILGTNTKTNIKMAITQAASGANKTANIVTSPKAVTQS
LLQLGGQMKNQHITLAALNQLTAGKIAVSTAGGKTVQIISPAKGQAIKQQ
ITGKPGVNTPILTATSSASTAGQTIKVVSSGATATSTPSTQYALVRAQLP
STSGGPAQTVTFIRAIGPNSSTSTGNTTVSVTPQQMAALLKGQQNGGQSQ
IQKVLGAATGTAQIRAQNPINVASSLKLAAQNSPSKLVSVQIPQKTGGVT
QMKTVSVGSILGSKVSTVTTQATNVSPMATLVSGVSAAKTTTGSSLVNQF
PAVRPAAIAALTKTTTMTPTTTTNTDAVTSTTAPLTETSEQKPAEVTKVD
STTNEAGEIKEEQDDVSNLLKSTESLDMPISTTDIKEEPKDEDVLKTTAG
IGTIDKDELPTEVPMEEAPPKTDLTETKDEVSSSTEGAEPTDTKMEVDQD
EKPPTNPTENCGEAEVKQEQPDQSSESVAASTLAQLASIASDGGNTGAVT
TPITDMNNPLSTLAALASSSPIATAPVVNGSSKAISVAAAAKKIVRGKGP
DGIKKNPAPWYDVAMTTNTSIVVSHYYVPVEAGDDNHDNVVPEGQYKGMR
KVELQPGTAFKFRVAGINVCGRGLYSDIAAFKTCVPGFPGAPCSIKITKN
DVGAHLSWEPPTNSAGKILEYAVYLAVDNKKGKEVTQTQLTFVRVYCGST
SSCTVTSETLKSAHIDFTTKPAIIFRIAAKNEKGYGPATQVRWLQDLKDL
PENKLKRMAEARNDAAKRAKLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010224XLOC_010224Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018194TCONS_00018194Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR015915Kelch-typ_b-propeller
IPR003961FN3_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1087..1211
e-value: 5.6E-13
score: 48.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 357..1085
e-value: 6.3E-17
score: 61.1
NoneNo IPR availablePFAMPF13418Kelch_4coord: 20..57
e-value: 1.1E-5
score: 25.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 768..816
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 395..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 832..930
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableSUPERFAMILY117281Kelch motifcoord: 45..349
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 2..165
e-value: 5.5E-30
score: 104.1
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 166..356
e-value: 2.2E-29
score: 101.9
IPR003961Fibronectin type IIICDDcd00063FN3coord: 1089..1190
e-value: 8.84168E-6
score: 44.4095
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 1021..1201

Blast
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BLAST of TCONS_00018194-protein vs. Swiss-Prot (Human)
Match: HCFC1 (Host cell factor 1 OS=Homo sapiens GN=HCFC1 PE=1 SV=2)

HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0
Identity = 261/388 (67.27%), Postives = 327/388 (84.28%), Query Frame = 0 
Query:    6 KWKCVKEPSGPSPKPRHGHRAVAIRDLIVIFGGGNEGIVEELHVYNTATNQWFVPAVQGDIPPGCAAFGFVCDGTRLLIFGGMVEYGRYSNELYELQASRWEWKHLHPKAPANNITPCARLGHSFTLVGKRVFLFGGLANDSEDPRSNIPRYLNDLYTLDLSQHDN-LQWDVPCTYGQPPTPRESHSAVLHTAENGKHPRLFIYGGMSGCRLGDVYILDVEKMLWSKPVIHGIAPLPRSLHTAVMIGKRMFVFGGWVPLIVEDGR-SSHEKEWKCTNTLACLNVEKLRWETINVEGADDQMPKPRAGHAAVNVHTRMYIWSGRDGYRRAWNNQVENVCCKDLWFLETERPPAPSRVQLVRATTTTLEVCWGTIPTADAYIIQIQKYEV 391
            +WK V   SGP P+PRHGHRAVAI++LIV+FGGGNEGIV+ELHVYNTATNQWF+PAV+GDIPPGCAA+GFVCDGTRLL+FGGMVEYG+YSN+LYELQASRWEWK L  K P N   PC RLGHSF+LVG + +LFGGLANDSEDP++NIPRYLNDLY L+L      + WD+P TYG  P PRESH+AV++T ++ K  +L IYGGMSGCRLGD++ LD++ + W+KP + G+APLPRSLH+A  IG +M+VFGGWVPL+++D + ++HEKEWKCTNTLACLN++ + WETI ++  +D +P+ RAGH AV ++TR+YIWSGRDGYR+AWNNQ   VCCKDLW+LETE+PP P+RVQLVRA T +LEV WG + TAD+Y++Q+QKY++
Sbjct:   18 RWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIDTLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQ---VCCKDLWYLETEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDI 402

HSP 2 Score: 268.085 bits (684), Expect = 5.163e-73
Identity = 142/305 (46.56%), Postives = 195/305 (63.93%), Query Frame = 0 
Query:  938 SIASDGGNTGAVTTPITDMNNPLSTLAALA-SSSPIATAPVVNGSSKAISVAAAAKKIVRGKGPDGIKKNPAP------------WYDVAMTTNTSIVVSHYYVPVEAGDDNHDNVVPEGQYKGMRKVELQPGTAFKFRVAGINVCGRGLYSDIAAFKTCVPGFPGAPCSIKITKNDVGAHLSWEPPTNSAGKILEYAVYLAVDNKKG----KEVTQTQLTFVRVYCGSTSSCTVTSETLKSAHIDFTTKPAIIFRIAAKNEKGYGPATQVRWLQDL-KD----LPENKLKRMAEARNDAAKRAK 1220
            +I S+  N  A T P T    P +   +LA S++ +A  PVV  S   +  AA   ++  G    G+K +  P            W+DV +   T+++V+HY++P +    + D++     Y  ++K ELQPGTA+KFRVAGIN CGRG +S+I+AFKTC+PGFPGAPC+IKI+K+  GAHL+WEPP+ ++GKI+EY+VYLA+ + +     K  T  QL F+RVYCG + SC V S +L +AHID+TTKPAIIFRIAA+NEKGYGPATQVRWLQ+  KD     P NK    +     A K++K
Sbjct: 1727 AIESNCLNELAGTVPSTVALLPSTATESLAPSNTFVAPQPVVVASPAKLQAAATLTEVANGIESLGVKPDLPPPPSKAPMKKENQWFDVGVIKGTNVMVTHYFLPPDDAVPSDDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDSSGTKPANKRPMSSPEMKSAPKKSK 2031
The following BLAST results are available for this feature:
BLAST of TCONS_00018194-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HCFC15.163e-7367.27Host cell factor 1 OS=Homo sapiens GN=HCFC1 PE=1 S... [more]
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