TCONS_00018101-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018101-protein
Unique NameTCONS_00018101-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length615

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018101-protein ID=TCONS_00018101-protein|Name=TCONS_00018101-protein|organism=Clytia hemisphaerica|type=polypeptide|length=615bp
EKYIHFQKKEQKSKNNMDYFSRGFKSVLGGPEEGQEGPSGAETIDRLCDR
VSSATLLEDRRDAVRAIKSLSKKFRLEVGTTGMTILLTVLEKDRNDAEIC
GLALEALVNIMTTSEETTGPTQDDELALQFAEIFLKNTENIPTLLALLEE
YDFRVRWPTVRLLSLLLESRALQIQQVVLVSPLGVSRLMDLLSDTREVIR
NDGLLLLIQLTKGNAAIQKIVAFENAFDKLMEVITEEGYSDGGIVVEDCL
QLMTNLFNPSNINFFREGSYIQRMVPFFDFSEYSSAGRQWTEEKVKNVLL
MLKLVRLLVSPNNPPQSTLSSQKILHSCNLLKILCDILMTIGIPAEILTE
TVNTVGGIIRGNQTNQAFFSVVDAPYNPPKPAIVVLLMSMISDKQPFTLR
CAVLYCFQCYLYKNTQGQQRIISTLLPSSAEASNVTAGQLLCGGLFSPDP
FSNWCAAIALSHALLGNKELKEQLLRVQLATGVSNQPVSLLQQCCNILSN
GGSTVQTRAAVLSLLCSWTSNCPVAVSHLLSNGAIIPYLIACVEQPCDTH
EAVIQGLSAILIGVCIVYNGNDVEAFSIDAIKRLITTRLDPEHFLAKIND
VSKTEPFTNAAKHTQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010152XLOC_010152Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018101TCONS_00018101Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR006953Vesicle_Uso1_P115_head
IPR016024ARM-type_fold
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0000139Golgi membrane
Vocabulary: Biological Process
TermDefinition
GO:0048280vesicle fusion with Golgi apparatus
GO:0006886intracellular protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0048280 vesicle fusion with Golgi apparatus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0000139 Golgi membrane
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 380..592
e-value: 2.3E-6
score: 26.6
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 74..360
e-value: 9.2E-51
score: 172.2
IPR006953Vesicle tethering protein Uso1/P115-like , head domainPFAMPF04869Uso1_p115_headcoord: 362..613
e-value: 6.9E-48
score: 163.3
NoneNo IPR availableCDDcd00020ARMcoord: 141..257
e-value: 9.36685E-4
score: 37.294
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 56..314
coord: 347..549

Blast
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BLAST of TCONS_00018101-protein vs. Swiss-Prot (Human)
Match: USO1 (General vesicular transport factor p115 OS=Homo sapiens GN=USO1 PE=1 SV=2)

HSP 1 Score: 680.248 bits (1754), Expect = 0.000e+0
Identity = 344/604 (56.95%), Postives = 452/604 (74.83%), Query Frame = 0 
Query:   20 FSRGFKSVLGGPEEGQEGPSGAETIDRLCDRVSSATLLEDRRDAVRAIKSLSKKFRLEVGTTGMTILLTVLEKDRNDAEICGLALEALVNIMTTSEET----TGPTQDDELALQFAEIFLKNTENIPTLLALLEEYDFRVRWPTVRLLSLLLESRALQIQQVVLVSPLGVSRLMDLLSDTREVIRNDGLLLLIQLTKGNAAIQKIVAFENAFDKLMEVITEEGYSDGGIVVEDCLQLMTNLFNPSNIN--FFREGSYIQRMVPFFDFSEYSSAGRQWTEEKVKNVLLMLKLVRLLVSPNNPPQSTLSSQKILHSCNLLKILCDILMTIGIPAEILTETVNTVGGIIRGNQTNQAFFSVVDAPYNPPKPAIVVLLMSMISDKQPFTLRCAVLYCFQCYLYKNTQGQQRIISTLLPSSAEAS--NVTAGQLLCGGLFSPDPFSNWCAAIALSHALLGNKELKEQLLRVQLATGVSNQPVSLLQQCCNILSNGGSTVQTRAAVLSLLCSWTSNCPVAVSHLLSNGAIIPYLIACVEQPCDTHEAVIQGLSAILIGVCIVYNGNDVEAFSIDAIKRLITTRLDPEHFLAKINDVSKTEPFTNAAKHTQ 615
            F RG   V+GG   G +  + AETI +LCDRV+S+TLL+DRR+AVRA+KSLSKK+RLEVG   M  L+ VL+ DR+D+EI G AL+ L NI++  EE         Q ++L  QF EIF+K  EN+  LL+LLEE+DF VRWP V+LL+ LL+    Q+QQ++LVSP+GVSRLMDLL+D+REVIRNDG+LLL  LT+ N AIQKIVAFENAF++L+++I+EEG SDGGIVVEDCL L+ NL   +N N  FF+EGSYIQRM P+F+  + +S    W+ +KV N+ LML+LVR+LVSP NPP +T S QK +  C LL+ LC ILM  G+PA+ILTET+NTV  +IRG Q NQ +F+ V+AP NPP+PAIVVLLMSM++++QPF LRCAVLYCFQC+LYKN +GQ  I+STLLPS+ +A+  +V+AGQLLCGGLFS D  SNWCAA+AL+HAL  N   KEQLLRVQLAT + N PVSLLQQC NILS  GS +QTR  +L LLC+W SNCP+AV+H L N A +P+L   + +     E ++QGL A+L+G+ I +N N +E++  + +K+LI  R+  E+F+ K+  +SK E ++ A++  Q
Sbjct:    3 FLRG---VMGGQSAGPQ-HTEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKKYRLEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNEEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIISEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSG---WSAQKVTNLHLMLQLVRVLVSPTNPPGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNAPSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLLPSTIDATGNSVSAGQLLCGGLFSTDSLSNWCAAVALAHALQENATQKEQLLRVQLATSIGNPPVSLLQQCTNILSQ-GSKIQTRVGLLMLLCTWLSNCPIAVTHFLHNSANVPFLTGQIAENLGEEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQLIEKRIGKENFIEKLGFISKHELYSRASQKPQ 598
The following BLAST results are available for this feature:
BLAST of TCONS_00018101-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
USO10.000e+056.95General vesicular transport factor p115 OS=Homo sa... [more]
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