TCONS_00018068-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018068-protein
Unique NameTCONS_00018068-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length465

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018068-protein ID=TCONS_00018068-protein|Name=TCONS_00018068-protein|organism=Clytia hemisphaerica|type=polypeptide|length=465bp
MDHGDSQHIQFVQSPTERTPLLISAPSVDSINNPLQEKLQIKKQKLVYSS
ITLADIFQKSVHTTFITSFLLFTYTDLDLDYKNSLASYYLFGLTSGLFAS
FLNMNIEYILSRQNAIVGGFIIYTFGLGGMSGFTSHVDSSSPASYQYFVL
IPLFFICIGEGMCKSCISDFTQLQFDEKFMPEKLSAYLKRLFWIGHIGAF
IMILFLLGIVEFTAFELAYGLGCICLLAGLLCFMSGWNNFEVYGRNASSV
VYLVKMIVDDAKEKKDLHMEQRKRASSFHESYEGRDFVGHWMDYAKHSFG
GSFTDNLVDQTKAFFKISLLFLSFIPYWVANAQVYGTFMFQDFHLQRKIG
NLRVPVTWMALFHVASVLIFVQVLDKLIVPFCRRKGIIFTSHWKISIGMV
FGIVAMICAAFVELVAHTSDINNQGEELIHQIGNKNLTFTDVHVLWTVPQ
FCFLGISEVLIGLTG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010127XLOC_010127Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018068TCONS_00018068Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000109POT_fam
IPR020846MFS_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000109Proton-dependent oligopeptide transporter familyPFAMPF00854PTR2coord: 114..463
e-value: 3.6E-46
score: 157.7
NoneNo IPR availableGENE3D1.20.1250.20coord: 45..239
e-value: 2.6E-7
score: 29.6
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 50..234
e-value: 5.46933E-4
score: 39.6045
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 48..234

Blast
[Close]
BLAST of TCONS_00018068-protein vs. Swiss-Prot (Human)
Match: S15A4 (Solute carrier family 15 member 4 OS=Homo sapiens GN=SLC15A4 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.193e-32
Identity = 92/343 (26.82%), Postives = 162/343 (47.23%), Query Frame = 0 
Query:  132 GFTSHVDSSSPASYQYFVLIPLFFICIGEGMCKSCISDFTQLQFDEKFMPEKLSAYLKRLFWIGHIGAFIMILFLLGIVEFTAFELAYGLGCICLLAGLLCFMSGWNNFEVYGRNASSVVYLVKMIVDDAKEKKDLHMEQR--KRASSFHESYEGRDFVGHWMDYAKHSFGGSFTDNLVDQTKAFFKISLLFLSFIPYWVANAQVYGTFMFQDFHLQ-RKIGNL-----RVPVTWMALFHVASVLIFVQVLDKLIVPFCRRKGIIFTSHWKISIGMVFGIVAMICAAFVELVAHTSDINNQGEELIHQ-IGNKNLTFTDVHVLWTVPQFCFLGISEVLIGLTG 465
            G  +     SPA++   VL+ L     G    K+ I+ F   Q  ++  PE    +    +W  ++GA + +  +  I +  +F   Y +  +C+    + F+ G + F     + S+   + K++      +K     Q   +    F +S +   F     D  K S GG FT+  V+  KA  KI  +FL+ IPYW    Q+  T++ Q  HL+  +I N+      +P  W+ +F    +L+ + + DKL+ P  RR G++ +S  +I++GM F    ++C+AF   +  +  +N   E+ I+Q IGN      D+ + W VPQ+  +GISE+   + G
Sbjct:  145 GPDAAARCCSPATFAGLVLVGL-----GVATVKANITPFGADQVKDR-GPEATRRFFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKILTYSCCSQKRSGERQSNGEGIGVFQQSSKQSLF-----DSCKMSHGGPFTEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFF----VMCSAFAAGILESKRLNLVKEKTINQTIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAG 472
The following BLAST results are available for this feature:
BLAST of TCONS_00018068-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S15A42.193e-3226.82Solute carrier family 15 member 4 OS=Homo sapiens ... [more]
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