TCONS_00018051-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018051-protein
Unique NameTCONS_00018051-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length594

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018051-protein ID=TCONS_00018051-protein|Name=TCONS_00018051-protein|organism=Clytia hemisphaerica|type=polypeptide|length=594bp
MTMGEVNPSFDHADKEHHHRQGTSKHADFKHLQEHYDEITDTKLPENLHR
GDITTVNRFLGYHDAMMATCGTFLVLPLRNLKNMVKTGEYDDLKKKHTLP
HDPIVVDDLAGYLYAMRSEFIMFFLGFLIICNIWETNIIRTNVIKRFDDF
MVLLGLFQMAAIVVLPFSIALNGAYPKEDITIAITTIVLIIINIFELIMI
LYGFYCPRLLNMAMKDWSNKEVRNFMLILCIKPIVEIIIIGIAGAFTFLN
YRISWVLLFMLVVGPLFRKLGFYLRRKNAGESKTQRCRFFYFYTKGQISR
ERVEAMSDAAIAIIACVLILDITVEEFPTKHAVHEQGLVAVLSHMLSEFR
VFFGAYMGVTSLWYVNHTVLHLFHTIDIGALYLQKIFLAFLCFLPITNNM
VVKHGAGKTTEAERQLTVRWVGGIFLAAGLTQLLMVIWGYYRRDKLLHRW
ATCTDNNHKNEMNLIQFRYVRFKIAVIPFFSLIGIFGSFAPGDISYYILT
VCVTCVMVTFLVLKFVFMNHINKPAILFTHDNGKMTTRQKSVDEIELRKE
MKAEIADGKVYDNEKEMERKMIAEAEKREIEEEMKDEKEEEALN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010119XLOC_010119Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018051TCONS_00018051Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010617TMEM175
Vocabulary: Molecular Function
TermDefinition
GO:0005267potassium channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005267 potassium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 563..593
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
IPR010617Endosomal/lysomomal potassium channel TMEM175PFAMPF06736DUF1211coord: 302..395
e-value: 2.9E-13
score: 50.0
coord: 58..166
e-value: 2.0E-8
score: 34.5

Blast
[Close]
BLAST of TCONS_00018051-protein vs. Swiss-Prot (Human)
Match: TM175 (Endosomal/lysomomal potassium channel TMEM175 OS=Homo sapiens GN=TMEM175 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.809e-26
Identity = 100/391 (25.58%), Postives = 175/391 (44.76%), Query Frame = 0 
Query:   53 ITTVNRFLGYHDAMMATCGTFLVLPLRNLKNMVKTGEYDDLKKKHTLPHDPIVVDDLAGYLYAMRSEFIMFFLGFLIICNIWETNIIRTNVIKRFDDFMVLLGLFQMAAIVVLPFSIALNGAYPKEDITIAITTIVLIIINIFELIMILYGFYCPRLLNMAMKDWSNKEV--RNFMLILCIKPIVEIIIIGIAGAFTFLNYRISWVLLFMLVVGPLFRKLGFYLRRKNAG--ESKTQRCRFFYFYTKGQISRERVEAMSDAAIAIIACVLILDITVEEFPTKHAVHEQ---GLVAVLSHMLSEFRVFFGAYMGVTSLWYVNHTV-LHLFHTIDIGALYLQKIFLAFLCFLPITNNMVVKHGAGKTTEAERQLTVRWVGGIFLAAGLTQLLM 435
            I    R L + DA+++   T ++LP+ +   +    ++D   ++                L A R    ++ + FLI+   W  +     V+ + DD + LL L  M  I  LP++ +L   +P   + I +  + +I I + + +++ Y F+ P LL+  ++  +++ +  R+ + I+   P     +   A  F+     +S++L+  +++ P   K+  + R +  G  E        F F     +S+ERVEA SD   AI+A +LILDI  +  P    V E+    LVA LS     F  +FG++  V  LW+ +H++ LH+        L L  + LAF+  LP+              E ER   VR    I   A + QL M
Sbjct:   30 IQCSQRMLSFSDALLSIIATVMILPVTH-TEISPEQQFDRSVQR----------------LLATR--IAVYLMTFLIVTVAWAAHTRLFQVVGKTDDTLALLNLACMMTITFLPYTFSLMVTFPDVPLGIFLFCVCVIAIGVVQALIVGYAFHFPHLLSPQIQRSAHRALYRRHVLGIVLQGP----ALCFAAAIFSLFFVPLSYLLMVTVILLPYVSKVTGWCRDRLLGHREPSAHPVEVFSFDLHEPLSKERVEAFSDGVYAIVATLLILDICEDNVPDPKDVKERFSGSLVAALSATGPRFLAYFGSFATVGLLWFAHHSLFLHVRKATRAMGL-LNTLSLAFVGGLPLAYQQTSAFARQPRDELER---VRVSCTIIFLASIFQLAM 393
The following BLAST results are available for this feature:
BLAST of TCONS_00018051-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM1757.809e-2625.58Endosomal/lysomomal potassium channel TMEM175 OS=H... [more]
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