TCONS_00017997-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017997-protein
Unique NameTCONS_00017997-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length329

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017997-protein ID=TCONS_00017997-protein|Name=TCONS_00017997-protein|organism=Clytia hemisphaerica|type=polypeptide|length=329bp
MSFTVYEVKVEILSEVGIKHRRLFKMAAASTSSEKLNSCVKTDVFLSHDW
GEDGITNHKKVEKINEAIKGLGYVTWFDNERMVGNVREQMANGIENTKCF
IAFITKRYHNKVVFGTDRDNCRVEFDFASMKVPMVAVLLDPSMKNPHDWK
GNLGLTLATKLYIDLSGDINDEKYLTNQLKLLEKDLTSKRIFPNKLEETT
NELKVLDIRKEENPLGKNAVENQETIPDERIEEMKGKADNLLKNGEWAEA
IPLYEDIIKKQTTTLGENHEATLTTRFLLAHCYYDQKDYQKAKQILQDVG
EKQSSTLGENHDDTVRSKGLLKACNELIN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010087XLOC_010087Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017997TCONS_00017997Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000157TIR_dom
IPR011991WHTH_DNA-bd_dom
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000157Toll/interleukin-1 receptor homology (TIR) domainGENE3D3.40.50.10140coord: 39..245
e-value: 5.2E-12
score: 45.6
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPFAMPF13676TIR_2coord: 44..155
e-value: 3.7E-8
score: 33.5
IPR000157Toll/interleukin-1 receptor homology (TIR) domainSUPERFAMILY52200Toll/Interleukin receptor TIR domaincoord: 33..180
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 246..327
e-value: 9.3E-15
score: 54.2
NoneNo IPR availablePFAMPF13424TPR_12coord: 236..298
e-value: 3.1E-11
score: 43.3
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 228..299

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017997-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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