TCONS_00017903-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017903-protein
Unique NameTCONS_00017903-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length257

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017903-protein ID=TCONS_00017903-protein|Name=TCONS_00017903-protein|organism=Clytia hemisphaerica|type=polypeptide|length=257bp
VSRERCQASFEDAIITQNMMCAAASRTDACQGDSGGPMVFNQRDANGLDQ
FYLAGIISWGRGCARPDFPGVYTNVANLREWIDEIVNADQEATIETPEVT
EPSETIDTTEDVVPFFQFFSQRNRDHFYTYNQREATRRYRLKRNNNVVCR
ILRRALPEGTRPLYRYFDGSHRRRSRTLNDHFMTTNEAETRSTEFRSYRR
RSIAGYCFTSQKSDTLPLHRYHLKTGNVRDHYYTTEENGPQGYTLDDFTD
PCYVYPA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010038XLOC_010038Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017903TCONS_00017903Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001254Trypsin_dom
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 1..82
e-value: 3.2E-22
score: 79.4
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 1..87
score: 15.872
NoneNo IPR availableGENE3D2.40.10.10coord: 1..94
e-value: 1.6E-27
score: 95.7
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 28..39
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 1..87

Blast
[Close]
BLAST of TCONS_00017903-protein vs. Swiss-Prot (Human)
Match: TM11E (Transmembrane protease serine 11E OS=Homo sapiens GN=TMPRSS11E PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.536e-19
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0 
Query:    9 SFEDAIITQNMMCAAA--SRTDACQGDSGGPMVFNQRDANGLDQFYLAGIISWGRGCARPDFPGVYTNVANLREWI 82
            ++ DAI T  M+CA +   +TDACQGDSGGP+V     ++  D +YLAGI+SWG  CA+P+ PGVYT V  LR+WI
Sbjct:  347 AYNDAI-TPRMLCAGSLEGKTDACQGDSGGPLV----SSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWI 417
The following BLAST results are available for this feature:
BLAST of TCONS_00017903-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM11E5.536e-1953.95Transmembrane protease serine 11E OS=Homo sapiens ... [more]
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