Dll2 distalless homeodomain protein (polypeptide) - C. hemisphaerica

Overview
NameDll2 distalless homeodomain protein
Unique NameTCONS_00017798-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length326

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017798-protein ID=TCONS_00017798-protein|Name=Dll2 distalless homeodomain protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MVVTSDEKPSDAISPSLASAAMSFPPPPQFQGLLPPSGLKIPRFGGMMMD
DTMKMNPFGFSLPFTTMSHVPYLKPVSPKPEDQSEDDKAGSSDDESKDGD
DKNDKNNNKKGGAGGRKSRKPRTIYSSHQLRELNRRFSRTQYLALPERAE
LAAELNLTQTQIKIWFQNKRSKLKKIVKSGGVPPISPTIQSVYNGETRVP
VTQWENSLKAASALAASHLTPPSPSAITFSSSAPTYSHTPASSVHAIPTT
ASSFFQSAVQSSMYANMWYNPPPVPPPTGGDLTNADSSPEAALPTTSTTS
SFPMFPNMDLLSQAAQSMYNQSQSCI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009976XLOC_009976Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017798TCONS_00017798Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020479Homeobox_metazoa
IPR000047HTH_motif
IPR001356Homeobox_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020479Homeobox domain, metazoaPRINTSPR00024HOMEOBOXcoord: 165..174
score: 68.97
coord: 155..165
score: 60.7
coord: 140..151
score: 42.47
IPR000047Helix-turn-helix motifPRINTSPR00031HTHREPRESSRcoord: 147..156
score: 52.33
coord: 156..172
score: 57.97
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 118..180
e-value: 7.6E-24
score: 95.2
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 119..175
e-value: 8.9E-20
score: 70.2
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 116..176
score: 20.034
NoneNo IPR availableGENE3D1.10.10.60coord: 95..177
e-value: 4.5E-25
score: 87.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..301
NoneNo IPR availableCDDcd00086homeodomaincoord: 119..175
e-value: 1.84535E-22
score: 87.684
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 151..174
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 115..178

Blast
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BLAST of Dll2 distalless homeodomain protein vs. Swiss-Prot (Human)
Match: DLX1 (Homeobox protein DLX-1 OS=Homo sapiens GN=DLX1 PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 1.234e-32
Identity = 67/132 (50.76%), Postives = 82/132 (62.12%), Query Frame = 0 
Query:   57 PFGFSLPFTTMSHV--PYLKPVSPKPED----QSEDDKAGSSDDESKDGDDKNDKNNNKKGGAGGRKSRKPRTIYSSHQLRELNRRFSRTQYLALPERAELAAELNLTQTQIKIWFQNKRSKLKKIVKSGGV 182
            P G+    +  SH   PY+  V   P      QS  +  G+  ++S   +    + N K     G+K RKPRTIYSS QL+ LNRRF +TQYLALPERAELAA L LTQTQ+KIWFQNKRSK KK++K GG 
Sbjct:   66 PLGYPYVNSVSSHASSPYISSVQSYPGSASLAQSRLEDPGADSEKSTVVEGGEVRFNGK-----GKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGGA 192
The following BLAST results are available for this feature:
BLAST of Dll2 distalless homeodomain protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DLX11.234e-3250.76Homeobox protein DLX-1 OS=Homo sapiens GN=DLX1 PE=... [more]
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