TCONS_00017736-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017736-protein
Unique NameTCONS_00017736-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length317

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017736-protein ID=TCONS_00017736-protein|Name=TCONS_00017736-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
MKFQMSFIGNLLSKQILFSTTNKFAINSIKQSLLLTQQSKRLMSGQVITN
TADTGLPLKEVLHQLQEYASPSIAEGWDNVGLLLEPSSPHTVKHLFLTND
LTEDVLDEAVSKKADLILSYHPPIFSSIKRITQEAWKNRLIIKCFENRIA
IYSPHTSYDVVKGGVNDWLMSCFHGDTKPIKPLEPGVDNGFGQGRICTLK
EPLAIEEVVQKVKTHLGLPYLRLATAPGVEQVQSIACCAGSGSSVLRGVR
ADVFLTGEMSHHDVLDAVSTKSHVILCEHSNTERGFLKTLIPVFTGMLKS
KVKVTVSELDKDPLVVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009934XLOC_009934Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017736TCONS_00017736Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002678GTP_cyclohydrolase_I/Nif3
IPR017222NIF3L1_animal
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002678GTP cyclohydrolase 1 type 2/Nif3PFAMPF01784NIF3coord: 61..291
e-value: 5.6E-73
score: 245.5
IPR002678GTP cyclohydrolase 1 type 2/Nif3TIGRFAMTIGR00486TIGR00486coord: 58..312
e-value: 1.9E-53
score: 179.7
IPR002678GTP cyclohydrolase 1 type 2/Nif3SUPERFAMILY102705NIF3 (NGG1p interacting factor 3)-likecoord: 58..315
IPR017222NIF3-like protein 1, animalPIRSFPIRSF037490UCP037490_NIF3coord: 176..317
e-value: 3.0E-43
score: 145.4
coord: 49..189
e-value: 3.0E-65
score: 217.8
NoneNo IPR availableGENE3D3.40.1390.30coord: 49..166
e-value: 2.3E-33
score: 114.4
NoneNo IPR availableGENE3D3.40.1390.30coord: 167..278
e-value: 8.1E-32
score: 109.7

Blast
[Close]
BLAST of TCONS_00017736-protein vs. Swiss-Prot (Human)
Match: NIF3L (NIF3-like protein 1 OS=Homo sapiens GN=NIF3L1 PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 3.819e-50
Identity = 79/137 (57.66%), Postives = 99/137 (72.26%), Query Frame = 0 
Query:   47 VITNTADTGLPLKEVLHQLQEYASPSIAEGWDNVGLLLEPSSPHTVKHLFLTNDLTEDVLDEAVSKKADLILSYHPPIFSSIKRITQEAWKNRLIIKCFENRIAIYSPHTSYDVVKGGVNDWLMSCFHGDT-KPIKP 182
            +I N++ + + LK +L  L ++AS S AE WDNVGLL+EPS PHTV  LFLTNDLTE+V++E + KKADLILSYHPPIF  +KRIT   WK RL+I+  ENR+ IYSPHT+YD    GVN+WL       T +PI P
Sbjct:   19 LICNSSRSFMDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKADLILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGACTSRPIHP 155

HSP 2 Score: 141.739 bits (356), Expect = 2.672e-39
Identity = 69/129 (53.49%), Postives = 92/129 (71.32%), Query Frame = 0 
Query:  192 GQGRICTLKEPLAIEEVVQKVKTHLGLPYLRLATAPGV---EQVQSIACCAGSGSSVLRGVRADVFLTGEMSHHDVLDAVSTKSHVILCEHSNTERGFLKTLIPVFTGMLKSKVKVTVSELDKDPLVVV 317
            G GR+CTL E +++  ++ ++K HL L ++RLA   G     QV+ +A CAGSGSSVL+GV AD++LTGEMSHHD LDA S   +VILCEHSNTERGFL  L  +    L++K+ + +SE D+DPL VV
Sbjct:  249 GMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQVKVVALCAGSGSSVLQGVEADLYLTGEMSHHDTLDAASQGINVILCEHSNTERGFLSDLRDMLDSHLENKINIILSETDRDPLQVV 377
The following BLAST results are available for this feature:
BLAST of TCONS_00017736-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NIF3L3.819e-5057.66NIF3-like protein 1 OS=Homo sapiens GN=NIF3L1 PE=1... [more]
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