TCONS_00017674-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017674-protein
Unique NameTCONS_00017674-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length313

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017674-protein ID=TCONS_00017674-protein|Name=TCONS_00017674-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
MDRNSGLDDLVNVSIDMLYSEQEAQVAAQAIAPENEASNKTKSGKKMIGC
PICGIEYATLYNLKRHMATKHKDVPIPDTLSRGNTKCLECNARFYQTKEL
VKHLESEHKMEFQIETLTFRDLEEFDAWKDNYEKTNHCYYIAYGSRWDDD
PGKNFKDFRCNRSGWYRSKKSNDEPRQRKMKSAGSNKIGNNCTSTIKLRD
KVDGTLQATINMTHYSHEIEIKHVSRKVRDYNIEQGTTDYIYPDTKSVKR
AYKRRVTPAQREELSNVKYQIQAELLKIQELVEGSSVSNLQNIQMLYNRL
QTARTVYEETNVP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009886XLOC_009886Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017674TCONS_00017674Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 48..71
e-value: 0.026
score: 23.7
coord: 85..108
e-value: 0.67
score: 19.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 87..108
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 50..71
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 85..113
score: 8.891
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 47..104
NoneNo IPR availableGENE3D3.30.160.60coord: 97..199
e-value: 0.085
score: 12.7
NoneNo IPR availableGENE3D3.30.160.60coord: 59..96
e-value: 2.7E-8
score: 33.3
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 50..71
e-value: 1.8E-4
score: 21.7
NoneNo IPR availableGENE3D3.30.160.60coord: 29..58
e-value: 5.5E-4
score: 19.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..188

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017674-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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