TCONS_00017497-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017497-protein
Unique NameTCONS_00017497-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1106

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017497-protein ID=TCONS_00017497-protein|Name=TCONS_00017497-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1106bp
MEKQHNDDLSGLLHVKNAPSTSGLGKLKGSKKHWCVLNKRTNQLEFHKNE
KEASTERPHECVPLFGAGISFGSSTEHEFIINIRGVEYCISADTHKTMMK
WVNTLQKQVKLKPAVTGSPGTRDSILQAVPEDEPLEIKPTHEEKKTKKRS
FFQRIFSRKRSRKDLTDHVANAAQETEEKRTVQAAPLRSVVGSMQDITDK
KVSCNECNLMQGRNIYLNEQVQKLNEDCENIVEDLRAYRRKYESLETEST
NIKRDFVCTILDSLVDEDDSHKVTTTVPFSKKILTLLERENNETLPKFNS
DGKMDLHEDRFGFQHGKRDSPLQTMLYTCQILKHKYTTLLQESSEHYKKW
QTFAGNVNHHPFKLEEENLLKLVQKGIPHEFRSTIWKLVINKRVEEVVSE
KGKNYYNSLIKRLPDLMEEEEIDGSIEKQIKIDLLRTFPTHKDFQSMDSG
KVPVLQRVLRAYILHNPEISYCQGMNFMVAFGLLYLDEETSFWLLVAVTE
LFFCKTHYNTYLSGTQANQRVFEAICHQEMPGLMKHLDDLTCELSPVTFN
WFMTIFVDSLPIEVVLHVWDVFLVYGHSVLYKIAFSLIKIHQKNILKSKD
SLMTMRRLKKMGKNYHDNEQLMNDVFNTADPLPAQQLLQLYNNYLEEIEE
ENYKRKQEDEEYEKKRQKLKFTPKQMMVSISDNLDALEDDMIIKCAECEA
NRNNVWLCCSSDLMAQIFVLNVASRNIVPIQWQVHCKCLDMVRFARLNMM
LVSTIKSGLHAIDIDKKTEVWSLQLSGTALSISCDPSGNVILTLMDGTIA
FLTIKTKEHPTQPTYVDISRSPVLCGSLIDDLFWCGAANTIFVLDVQTLE
TTRTMRVCPVERHSVSHLVDSKYGVWSSVEGSSVVHLWHKTKYTALLTVD
ILVEGGLASEKKTGTLLSTGITTIVELKGKLWVGFGNGRFIINDVIQKAE
DTSDDLNDAITSYKTSLSLNDIVGAIKTGRSDSKKKGPQKLGVITCSHAL
VGERLDEKQLSPTHSHNGDDSTDFAMVEKRMSQALESGTDNLFLKMNQVQ
RICEHRVNCFVQCRNDEKLVLTCMGALNDDSSVVLWSSEKHDGREMWFAQ
TVSYSE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009792XLOC_009792Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017497TCONS_00017497Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR000195Rab-GTPase-TBC_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR011993PH_dom-like
IPR011047Quinoprotein_ADH-like_supfam
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 37..57
NoneNo IPR availableCOILSCoilCoilcoord: 221..255
NoneNo IPR availableCOILSCoilCoilcoord: 634..668
NoneNo IPR availableGENE3D1.10.10.750coord: 345..391
e-value: 7.5E-7
score: 28.5
NoneNo IPR availableGENE3D1.10.8.270coord: 397..499
e-value: 7.3E-22
score: 77.0
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 7..112
e-value: 2.0E-8
score: 44.0
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 23..109
e-value: 1.6E-6
score: 28.5
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 6..110
score: 10.123
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 373..599
e-value: 6.3E-47
score: 171.9
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 380..596
e-value: 4.0E-50
score: 170.3
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 376..576
score: 33.02
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 363..536
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 514..627
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 582..1097
e-value: 6.6E-14
score: 51.3
IPR011993PH domain-likeGENE3D2.30.29.30coord: 2..190
e-value: 1.4E-13
score: 50.0
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 9..111
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 700..941

Blast
[Close]
BLAST of TCONS_00017497-protein vs. Swiss-Prot (Human)
Match: TBD2A (TBC1 domain family member 2A OS=Homo sapiens GN=TBC1D2 PE=1 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 1.361e-48
Identity = 104/295 (35.25%), Postives = 164/295 (55.59%), Query Frame = 0 
Query:  369 LLKLVQKGIPHEFRSTIWKLVINKRVEEVVSEKGKNYYNSLIKRLPDLMEEEEIDGSIEKQIKIDLLRTFPTHKDFQSMDSGKVPVLQRVLRAYILHNPEISYCQGMNFMVAFGLLYLDEETS-FWLLVAVTELFFCKTHYNTYLSGTQANQRVFEAICHQEMPGLMKHLDDLTCELSPVTFNWFMTIFVDSLPIEVVLHVWDVFLVYGHSVLYKIAFSLIKIHQKNILKSKDSLMTMRRLKKMGKNYHDNEQLMNDVFNTADPLPAQQLLQLYNNYLEEIEEENYKRKQEDEEY 662
            L +L++ G+P E R  +W+ +++ RV+ + +      Y  L+ R       +  +    +QI++DL RTFP +K F    S     L+RVL A+   NP I YCQG+N + A  LL L+EE S FW LVA+ E      +Y   L+ +Q +QRV + +  +++P LM HL     +LS VTFNWF+ +F DSL   ++L VWD FL  G  V+++ A ++ K ++K IL+ ++ L   + L+   K   ++ +LMN  FN  +P   +QL QL   + E +E E  + +Q   EY
Sbjct:  618 LKQLLRAGVPREHRPRVWRWLVHLRVQHLHT---PGCYQELLSR------GQAREHPAARQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAIFKYNEKEILRLQNGLEIYQYLRFFTKTISNSRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQLKAEY 903
The following BLAST results are available for this feature:
BLAST of TCONS_00017497-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBD2A1.361e-4835.25TBC1 domain family member 2A OS=Homo sapiens GN=TB... [more]
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