TCONS_00017483-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017483-protein
Unique NameTCONS_00017483-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length159

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017483-protein ID=TCONS_00017483-protein|Name=TCONS_00017483-protein|organism=Clytia hemisphaerica|type=polypeptide|length=159bp
MMDEHFIRSFSFADKENLGYLNRHQLKIFYICLFGHKPSPFELETLFNKS
GKIDGKTIPEQKPNNLLSKQELWNHIESQRQYKDKYEEMREIFQAFDLRG
KGFINFEDFKEGMKVKYKNMDEINMQKYFRELDSNCDDRVSFHDFVLMMQ
DGKSIFENL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009783XLOC_009783Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017483TCONS_00017483Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 88..116
e-value: 0.03
score: 23.5
coord: 124..152
e-value: 2.2
score: 15.0
coord: 5..33
e-value: 84.0
score: 2.2
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 7..113
e-value: 5.7E-8
score: 33.0
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..36
score: 6.005
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 84..119
score: 14.039
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 120..155
score: 9.883
IPR002048EF-hand domainCDDcd00051EFhcoord: 88..150
e-value: 6.59822E-8
score: 44.8461
NoneNo IPR availableGENE3D1.10.238.10coord: 101..159
e-value: 7.2E-13
score: 47.9
NoneNo IPR availableGENE3D1.10.238.10coord: 2..74
e-value: 0.0012
score: 18.2
NoneNo IPR availableGENE3D1.10.238.10coord: 75..100
e-value: 4.1E-7
score: 29.5
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 133..145
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 4..152

Blast
[Close]
BLAST of TCONS_00017483-protein vs. Swiss-Prot (Human)
Match: EFC11 (EF-hand calcium-binding domain-containing protein 11 OS=Homo sapiens GN=EFCAB11 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.689e-16
Identity = 46/148 (31.08%), Postives = 77/148 (52.03%), Query Frame = 0 
Query:    6 FIRSFSFADKENLGYLNRHQLKIFYICLFGHKPSPFELETLFNKSGKIDGKTIPEQKPNNLLSKQELWNHIESQRQYKDKYEEMREIFQAFDLRGKGFINFEDFKEGMKVKYKNMDEINMQKYFRELDSNCDDRVSFHDFVLMMQDGK 153
            ++  F   D+++ GYL+R   K   + LFG+KPS  E++++ +         + E   N +  K+E      +QR Y++   E+R IF AFD   +GF+  EDFK+  +     + E  + + FRE+D + D  VSF DF   +  G+
Sbjct:   23 WVEVFKACDEDHKGYLSREDFKTAVVMLFGYKPSKIEVDSVMSSINPNTSGILLEGFLNIVRKKKE------AQR-YRN---EVRHIFTAFDTYYRGFLTLEDFKKAFRQVAPKLPERTVLEVFREVDRDSDGHVSFRDFEYALNYGQ 160
The following BLAST results are available for this feature:
BLAST of TCONS_00017483-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EFC111.689e-1631.08EF-hand calcium-binding domain-containing protein ... [more]
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