TCONS_00017307-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017307-protein
Unique NameTCONS_00017307-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length446

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017307-protein ID=TCONS_00017307-protein|Name=TCONS_00017307-protein|organism=Clytia hemisphaerica|type=polypeptide|length=446bp
MGDIQKCSMLLFILLTLVPSVKPDALQLTSETYQPTLDKNKVVFINFYAD
WCMFSQQLAPIFHKAADILHEEFDNVKLGRVDCEQQQDIALQNAVSKYPT
LKIYRDGKALRKEYRGQRSVDAFSQFIKQHLKPSVTDVTKLEDMKVDENT
NTVIAYFEGKGSPIYKTFEKVADELRESIDFIAVLGDASAQQRAVGEHVA
FKPKKKSGEEEATYTGNLEDAETLKTWANDKANPLVREITFENGEELTEE
GLPFLLLFHKPDDVTSIQRFKAAVTKELLQERGKMNFLLADGTTFSHPLH
HLGKRIDDLPLLCIDSFRHMYLFKDFNEIDVPGKLKQFVADLHSGKLHQD
FHNPPPEDKAAQGHHHGQPAQQQPDSTGAPPSEDSTGAPSADGQPTGAPS
GDKPSGSGSGSGKQPPETVFNKLAPSENRYTLLHWRDYSGNYRDEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009684XLOC_009684Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017307TCONS_00017307Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 16..141
e-value: 3.9E-27
score: 94.2
NoneNo IPR availablePFAMPF13848Thioredoxin_6coord: 157..341
e-value: 1.3E-37
score: 129.5
NoneNo IPR availableGENE3D3.40.30.10coord: 248..345
e-value: 2.1E-17
score: 62.8
NoneNo IPR availableGENE3D3.40.30.10coord: 142..234
e-value: 1.6E-9
score: 37.4
NoneNo IPR availableSFLDSFLDG00345PDI-likecoord: 27..130
e-value: 7.5E-27
score: 88.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..428
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 27..130
e-value: 2.3E-21
score: 75.5
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 12..132
score: 12.614
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 232..355
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 135..234
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 17..132

Blast
[Close]
BLAST of TCONS_00017307-protein vs. Swiss-Prot (Human)
Match: ERP44 (Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 3.832e-119
Identity = 186/436 (42.66%), Postives = 254/436 (58.26%), Query Frame = 0 
Query:    6 KCSMLLFILLTLVPSVKPDALQLTSETYQPTLDKNKVVFINFYADWCMFSQQLAPIFHKAADILHEEFDN---VKLGRVDCEQQQDIALQNAVSKYPTLKIYRDGKALRKEYRGQRSVDAFSQFIKQHLKPSVTDVTKLEDMK-VDENTNTVIAYFEGKGSPIYKTFEKVADELRESIDFIAVLGDASAQQRAVGEHVAFKPKKKSGEEEATYTGNLEDAETLKTWANDKANPLVREITFENGEELTEEGLPFLLLFHKPDDVTSIQRFKAAVTKELLQERGKMNFLLADGTTFSHPLHHLGKRIDDLPLLCIDSFRHMYLFKDFNEIDVPGKLKQFVADLHSGKLHQDFHNPPPEDKAAQGHHHGQPAQQQPDSTGAPPSEDSTGAPSADGQPTGAPSGDKPSGSGSGSGKQPPETVFNKLAPSENRYTLLHWRD 437
            +CS+LL +     P V  +   L +E     L+   V  +NFYADWC FSQ L PIF +A+D++ EEF N   V   RVDC+Q  DIA +  +SKYPTLK++R+G  +++EYRGQRSV A + +I+Q     + ++  L ++  +D +   +I YFE K S  Y+ FE+VA+ L +   F++  GD S  +R  G+++ +KP   S  +   Y G + + +    W  DK  PLVREITFENGEELTEEGLPFL+LFH  +D  S++ F+  V ++L+ E+G +NFL AD   F HPL H+ K   D P++ IDSFRHMY+F DF ++ +PGKLKQFV DLHSGKLH++F             HHG      PD T   P E +    S+                       PPE+ F KLAPSE RYTLL  RD
Sbjct:   13 RCSLLLLVTWVFTP-VTTEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITTLDRSKRNIIGYFEQKDSDNYRVFERVANILHDDCAFLSAFGDVSKPERYSGDNIIYKPPGHSAPD-MVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKFRHPLLHIQKTPADCPVIAIDSFRHMYVFGDFKDVLIPGKLKQFVFDLHSGKLHREF-------------HHG------PDPTDTAPGEQAQDVASS-----------------------PPESSFQKLAPSEYRYTLLRDRD 404
The following BLAST results are available for this feature:
BLAST of TCONS_00017307-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERP443.832e-11942.66Endoplasmic reticulum resident protein 44 OS=Homo ... [more]
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